Rv2681 - p.Asn108Asp
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
4 Sensitive
2 RR-TB
39 HR-TB
17 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;M.canetti;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage4.9 | 12 |
| lineage2.2.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| 10 | |
| lineage4.2;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 5 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 3 |
| lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.2.1 | 4 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| La3;lineage4.9 | 2 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| La1.8.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage5.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 97 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675554 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2514692 | Other | None | SRR28119805 | Other | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1640750 | Other | None | SRR3675568 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR212123 | Other | lineage4.9 | None | ERR3468544 | Other | lineage2.1;lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR4811142 | RR-TB | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR8976043 | HR-TB | lineage2.2 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3797016 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR5311083 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR3675236 | Other | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR4188350 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR29097066 | Sensitive | lineage4.9 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR5311096 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR3675558 | HR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR5311098 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | None | ERR161037 | Other | lineage4.9 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675464 | HR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR176751 | Other | lineage4.9 | None |
|---|
