EBG00000313339 - n.1960C>G
Drug resistance types
5 Sensitive
3 RR-TB
28 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| 30 | |
| lineage4.9 | 8 |
| lineage2.2.1 | 4 |
| lineage4.1 | 1 |
| lineage4 | 3 |
| La2 | 1 |
| lineage4.1.2.1 | 1 |
| La1.2 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage6.1.1 | 2 |
| lineage3 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693257 | Other | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045233 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6046644 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982246 | Sensitive | lineage4 | None | ERR323039 | HR-TB | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323053 | HR-TB | None | ERR4772225 | Other | La1.2 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR1034652 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797061 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3283032 | HR-TB | None | ERR3797044 | Other | None | ERR4798504 | Other | lineage3 | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR736835 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR987722 | HR-TB | None | ERR736865 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675234 | Other | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | ERR212121 | HR-TB | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | SRR3675571 | HR-TB | None |
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