lineage | Count |
---|---|
lineage4.8 | 2 |
49 | |
lineage4.1.1.2 | 1 |
lineage4.9 | 8 |
lineage4 | 31 |
lineage4.9;lineage2.1 | 1 |
lineage2.2.1.1 | 4 |
lineage2.2.1 | 5 |
La2 | 1 |
lineage4.1.2 | 2 |
lineage4.1.2.1;lineage2.2.1 | 1 |
lineage4.3.2.1 | 1 |
lineage6.1.1 | 2 |
lineage3.1.2 | 1 |
lineage3 | 1 |
lineage4.6.1.1 | 1 |
lineage1.1.3.1 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
La1.8.1 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | ERR4816151 | Other | lineage4.8 | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | SRR5341453 | Sensitive | None | ERR212001 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4816466 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR5341470 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6046594 | HR-TB | lineage4 | None | ERR2693257 | Other | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6044890 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR294266 | HR-TB | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR502524 | HR-TB | La2 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323053 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063896 | Sensitive | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3283032 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3797017 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3797036 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798504 | Other | lineage3 | None | ERR4797264 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR736835 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1173777 | Other | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR14801749 | Sensitive | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR1791747 | Other | La1.8.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR3675234 | Other | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675246 | Sensitive | lineage4 | None |
---|