Rv3596c - c.2013C>G
Drug resistance types
6 Sensitive
5 RR-TB
15 HR-TB
9 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2;lineage4.9 | 3 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9 | 15 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La3;lineage4.9 | 5 |
| lineage4.9;lineage9 | 2 |
| lineage3 | 3 |
| lineage1.1.2 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage2.2.1 | 5 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| 1 | |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 60 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6046210 | Other | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR29096150 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4798139 | RR-TB | lineage1.1.2 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR29097066 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR9125676 | Sensitive | lineage3 | None | SRR29096410 | Other | lineage4.9 | None | SRR16058354 | Sensitive | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR176751 | Other | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR29097026 | Other | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR987722 | MDR-TB | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
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