Rv0006 - p.Asp488Glu


Drug resistance types
66 Sensitive 27 RR-TB 24 HR-TB 113 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 31 Other
lineage Counts
lineage Count
lineage3 108
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La3;M.canetti;lineage2.1;lineage4.9 10
lineage4.9 24
lineage2.2.1 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9 24
La1.7;M.canetti;lineage4.9 4
lineage6.1.1 2
La1.7;lineage4.9 6
lineage2.1;lineage4.9;lineage6.3 2
lineage4.1.1.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage4.9 5
La1.7 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2;lineage4.9 3
lineage2.2 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
lineage4.6.3;lineage4.9 1
lineage4.8 1
lineage4.3.2.1 1
La1.2;La1.8.1 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.1.2.1 3
lineage4.9;lineage6.3 1
lineage2.1;lineage4.3.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La3;M.canetti;lineage3.1 1
lineage4.3.3 2
La3;M.canetti;lineage4.9 1
La1;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.8.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.1.3.1 1
2
La1.2.BCG 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.3.4.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 262
Geographic prevalence
Country level data for this variant is available for 20 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11050610 HR-TB lineage3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR21690100 Sensitive lineage3 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR3470677 MDR-TB lineage3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR3275881 HR-TB lineage3 nl
ERR3799304 RR-TB lineage6.1.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3470687 MDR-TB lineage3 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR24223006 Sensitive lineage3 None
ERR3470662 MDR-TB lineage3 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SAMN02414938 MDR-TB lineage3 se
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR3470640 MDR-TB lineage3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7069254 Sensitive lineage3 None
ERR3470700 MDR-TB lineage3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR11082121 Sensitive lineage3 None
ERR2517574 Sensitive lineage3 nl
ERR4820325 MDR-TB lineage3 gb
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9125417 Sensitive lineage3 None
SRR7517730 MDR-TB lineage3 None
ERR278572 Sensitive lineage3 None
SRR14782405 HR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR3470603 Sensitive lineage3 None
SRR13861400 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR24223017 Sensitive lineage3 None
SRR24223015 Sensitive lineage3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
ERR3468607 RR-TB lineage4.9 None
SRR21689839 Sensitive lineage3 None
ERR3470551 MDR-TB lineage3 None
SRR21690993 Sensitive lineage3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7069258 HR-TB lineage3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386931 Sensitive lineage3 None
ERR2446205 Sensitive lineage3 nl
SRR24223011 Other lineage3 None
SRR7240492 MDR-TB La1.7.1 None
SRR6046485 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR3470661 MDR-TB lineage3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR266542 Sensitive lineage3 None
SRR5341330 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR21689663 Sensitive lineage3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR12882160 RR-TB lineage3 None
ERR9787014 RR-TB lineage6.1.1 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR6397205 MDR-TB lineage3 None
ERR11050668 Sensitive lineage3 None
ERR3275572 Sensitive lineage3 nl
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR3470560 Sensitive lineage3 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR3470667 MDR-TB lineage3 None
ERR3275913 Sensitive lineage3 nl
SRR14782054 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR12882258 Sensitive lineage3 None
ERR3470670 MDR-TB lineage3 None
SRR27450622 Sensitive lineage3 None
ERR3470653 Sensitive lineage3 None
SRR1166804 MDR-TB lineage3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR5979463 MDR-TB lineage3 None
ERR3276107 HR-TB lineage3 nl
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR22048356 Sensitive lineage3 None
ERR3470655 Sensitive lineage3 None
ERR2446566 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR3470665 MDR-TB lineage3 None
ERR4818493 Sensitive lineage3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3470672 Sensitive lineage3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR2446294 Sensitive lineage3 nl
ERR3639822 MDR-TB lineage3 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR11044093 Other lineage3 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3470664 MDR-TB lineage3 None
ERR11081877 Sensitive lineage3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR10849244 Sensitive lineage3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR11081078 MDR-TB lineage3 None
ERR403348 Sensitive lineage3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
SRR1165369 MDR-TB lineage3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR27450566 Sensitive lineage3 None
ERR9119096 RR-TB lineage4.3.3 None
SRR24223004 Sensitive lineage3 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
SRR16058315 Sensitive lineage3 None
SRR7070665 HR-TB lineage3 None
SRR21690159 Sensitive lineage3 None
SRR24222979 Sensitive lineage3 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR21690982 HR-TB lineage3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3470671 Sensitive lineage3 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR21689893 Sensitive lineage3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR27450106 MDR-TB lineage3 None
ERR2512948 Sensitive lineage3 gb
ERR2517498 Sensitive lineage3 nl
SRR3675487 MDR-TB M.canetti;lineage4.9 None
ERR2446545 Sensitive lineage3 nl
SRR6045555 Other lineage4.9 None
ERR9125419 Sensitive lineage3 None
ERR323115 Sensitive lineage4.9 None
SRR2100953 Sensitive lineage3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR11067628 Sensitive lineage3 None
ERR4815687 Sensitive lineage3 gb
ERR11049157 Other lineage3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR24223008 Sensitive lineage3 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5917710 RR-TB lineage4.1.2.1 None
ERR11042998 Sensitive lineage3 None
SRR7070561 Sensitive lineage3 None
ERR3470684 Sensitive lineage3 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR16058317 Sensitive lineage3 None
SRR7517713 RR-TB lineage3 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR323107 HR-TB lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR3275489 Sensitive lineage3 nl
SRR6044815 RR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR23340067 MDR-TB lineage2.2.1 None
ERR11050472 Sensitive lineage3 None
SRR6045685 Sensitive lineage3 gb
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR1167099 MDR-TB lineage3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR11082613 HR-TB lineage3 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275673 Sensitive lineage3 nl
ERR2517483 Sensitive lineage3 nl
ERR5908228 RR-TB lineage4.3.3 None
ERR2446373 Sensitive lineage3 nl
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR5979458 MDR-TB lineage3 None
ERR3275581 Sensitive lineage3 nl
SRR24222981 Sensitive lineage3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1162836 MDR-TB lineage3 None
SRR24223023 Other lineage3 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR4822436 Sensitive lineage3 de
SRR1640750 RR-TB None
ERR987722 MDR-TB None
ERR3470702 MDR-TB lineage3 None
ERR6358979 HR-TB lineage4.9 None
ERR11081136 MDR-TB lineage3 None
SRR3675441 RR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675385 Other La1.7;lineage4.9 None
ERR11068101 Sensitive lineage3 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR21690825 HR-TB lineage3 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR6397206 MDR-TB lineage3 None
ERR11067952 Sensitive lineage3 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR7070612 Sensitive lineage3 None
SRR5535933 Other lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
ERR4816185 Sensitive lineage3 None
ERR3470675 MDR-TB lineage3 None
SRR20969708 HR-TB lineage2.2 None
ERR3470577 Sensitive lineage3 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR11068328 Sensitive lineage3 None