Rv3596c - c.2007C>T


Drug resistance types
10 Sensitive 6 RR-TB 19 HR-TB 11 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 23 Other
lineage Counts
lineage Count
lineage4.9 22
La1.7;lineage4.9 3
lineage4.9;lineage9 3
lineage3.1.2.2 1
lineage3 2
La2;lineage4.9;lineage9 1
lineage4.9;lineage7 5
lineage2.2.1 10
lineage2.2.1.1 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La3;lineage4.9 1
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage1 1
lineage1.1.2 1
1
lineage4.7 1
lineage4.2;lineage4.9 1
lineage4 3
La2;lineage4.9 1
lineage2.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
M.canetti;lineage4.9;lineage9 1
spoligotype Counts
spoligotype Count
None 71
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045191 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6045347 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR26399265 Other lineage2.2.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046878 Other lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4769474 HR-TB lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR15014655 Other M.canetti;lineage1 None
SRR29096150 Other lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
SRR1180172 Other lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR4769452 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR4811493 HR-TB lineage4.9 None
ERR987722 MDR-TB None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR7496523 Other lineage4.7 None
SRR6046382 Sensitive lineage2.2.1 None
SRR28394053 MDR-TB lineage2.2.1 None
SRR29096410 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR6045053 Other lineage4 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR6046593 Other lineage4.9 None
SRR17234902 MDR-TB lineage2.2.1 None
SRR3675582 Other lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR29097066 Sensitive lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR387051 Other lineage4.9 None