TB-Profiler
Home
Upload
SRA data
Rv0529
- c.486G>C
Drug resistance types
11 Sensitive
4 RR-TB
25 HR-TB
13 MDR-TB
4 Pre-XDR-TB
1 XDR-TB
113 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
31
20
lineage2.1;lineage4.9
14
lineage2.2.1
10
lineage4.9;lineage6.3
8
lineage4.1.2.1
7
lineage2.1;lineage4.9;lineage6.3
7
lineage2.1
5
La3;lineage2.1;lineage4.9;lineage6.3
4
lineage4.8
3
Showing 1 to 10 of 60 entries
Previous
1
2
3
4
5
6
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
171
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11049020
Other
lineage4.8
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
ERR13267017
Pre-XDR-TB
lineage2.2.1
None
ERR13285068
Sensitive
lineage4.9
None
ERR1334034
Other
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
None
ERR176549
Other
lineage4.3.4.2.1
None
ERR176793
Other
lineage4.1.1.1
None
ERR2027263
Other
lineage4
None
ERR2229542
Other
lineage4.8
None
Showing 1 to 10 of 171 entries
Previous
1
2
3
4
5
…
18
Next