EBG00000313339 - n.1980T>A
Drug resistance types
2 Sensitive
1 RR-TB
21 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 4 |
| lineage4.9 | 6 |
| 18 | |
| lineage2.2.1 | 5 |
| lineage3 | 2 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage1.1.2 | 1 |
| La2 | 1 |
| lineage6.1.1 | 2 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage6.1.3 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR176751 | HR-TB | None | ERR176740 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | ERR212121 | HR-TB | None | SRR6045399 | Other | None | SRR5341470 | HR-TB | None | SRR5818675 | Sensitive | lineage1.1.2 | None | SRR3675571 | HR-TB | None | ERR294266 | HR-TB | None | SRR6046397 | Other | None | ERR3283025 | HR-TB | None | ERR323039 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323053 | HR-TB | None | ERR1034652 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283041 | Other | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4772225 | Other | La1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR736865 | HR-TB | None | ERR6358991 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9119669 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987722 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1002680 | MDR-TB | lineage2.2.1 | None |
|---|
