EBG00000313339 - n.1980T>A
Drug resistance types
3 Sensitive
2 RR-TB
12 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage2.2.1 | 3 |
| lineage4.9 | 8 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage2.2.1.1 | 4 |
| lineage6.1.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| 1 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage6.1.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR867573 | Other | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR867572 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR176751 | Other | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None |
|---|
