lineage | Count |
---|---|
lineage4 | 41 |
49 | |
lineage4.9 | 4 |
lineage3.1.2 | 1 |
lineage3 | 2 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1 | 4 |
lineage2.2.1.1 | 1 |
lineage7;lineage2.2.1.2 | 1 |
La1.8.1 | 1 |
lineage2.2 | 1 |
lineage1.1.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.9;lineage2.1 | 1 |
La2 | 1 |
lineage4.1.2 | 1 |
lineage4.8 | 1 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 115 |
ID | Drug resistance | Lineage | Country iso2 | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4796254 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4798504 | Other | lineage3 | None | ERR6866022 | Other | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6866639 | Other | None | SRR10809074 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR736834 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | SRR1173777 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172310 | HR-TB | None | SRR14782405 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1180996 | HR-TB | lineage4 | None | SRR17832802 | HR-TB | lineage3 | None | SRR14801749 | Sensitive | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675488 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR8692807 | Other | lineage4.9 | None | ERR12328168 | HR-TB | lineage1.1.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR8692887 | Other | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675222 | Other | None | ERR176740 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675571 | HR-TB | None | ERR1035182 | HR-TB | lineage4.3.3 | pt | SRR5341470 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046133 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | ERR4830353 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045053 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6511621 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR502524 | HR-TB | La2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323039 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR1034652 | Other | None |
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