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SRA data
Rv1173
- c.2004C>G
Drug resistance types
0 Sensitive
13 RR-TB
53 HR-TB
42 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
24
La3;M.canetti;lineage2.1;lineage4.9
12
lineage4.9
11
M.canetti;lineage2.1;lineage4.9;lineage6.3
6
lineage2.1;lineage4.9
4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
4
lineage4.9;lineage9
2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
2
lineage4.6.3;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
132
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11252599
Other
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
None
ERR124642
MDR-TB
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124651
MDR-TB
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
None
ERR124652
HR-TB
La3;M.canetti;lineage2.1;lineage4.9
None
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