Rv0529 - c.852G>C


Drug resistance types
46 Sensitive 7 RR-TB 47 HR-TB 21 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 136 Other
lineage Counts
lineage Count
lineage4.9 84
lineage4.1.1.1 1
13
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 9
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.8 3
La1.8.1 2
lineage2.2.1 11
lineage2.1;lineage6.3 2
La1;lineage4.1.2 1
lineage2.1;lineage4.9 11
lineage4.3.4.1 2
lineage2.1 3
La1.7;lineage4.9 5
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4 3
M.canetti;lineage4.2 1
lineage2.2.1.1 2
La1.7;M.canetti;lineage4.9 2
lineage4.2;lineage4.9 3
lineage4.9;lineage6.3 8
lineage4.6.4;lineage4.9 1
lineage4.1.2.1 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.9;lineage6 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9 2
La3;lineage4.9 2
La3;lineage1.1.2 1
lineage1.1.2 3
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage9 2
lineage4.1.1.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1;lineage2;lineage4.9 1
lineage2.2.2;lineage4 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.4.2 1
La2;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.9 2
M.canetti;lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.4.2.1 2
lineage4.8;lineage4.9 2
La1.6;lineage4 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.2.BCG;La1.8.1 1
La1.7 2
M.canetti;lineage4.2;lineage4.9 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage4.9 1
lineage2.2 1
lineage1.1.1.1 1
lineage4.3.2.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.3 1
lineage3 2
M.canetti;lineage2.1;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
La1.2.BCG 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage7 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage3.1.2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.3.3 1
La3;lineage2 1
lineage6.3.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage4.1.2 1
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La3;lineage2.2.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 262
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR29093909 Other lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR11049020 Other lineage4.8 None
SRR7535086 Other None
ERR3797073 Other La1.8.1 None
SRR28119777 Other lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR29096150 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR12416840 MDR-TB lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR29096246 Sensitive La1.7;lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR29050928 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR3675311 Other lineage4.9 None
ERR11068570 Other lineage4 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR5341299 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR2514692 Other None
ERR212001 HR-TB None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323066 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR1172310 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4188247 HR-TB lineage4.9 None
ERR6358979 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR212123 Other lineage4.9 None
ERR4816999 Other None
SRR6789626 Other None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR124636 Sensitive lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR926161 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1165699 Other lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR9117709 Other None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR1180147 Other lineage2.2.1.1 None
ERR4796929 Sensitive lineage4.9 None
SRR29097037 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR25827682 Other None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR2693252 Sensitive lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR29096541 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675222 Other La1.7 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR1063896 Sensitive None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675214 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR4816585 Other lineage2.2 None
DRR099693 Sensitive lineage1.1.1.1 None
ERR323115 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR16156817 Other lineage4.9 None
SRR29097058 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR28119753 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
SRR10808805 Other La1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR11466174 Other lineage4.8 None
ERR3273109 HR-TB lineage4 None
ERR926163 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR4800341 Other lineage3 None
SRR29096387 Sensitive M.canetti;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926164 Other lineage4.9 None
SRR3675441 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR29097026 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR323085 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR3797060 Other La1.8.1 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR9971112 Other lineage2.2.1 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR5341387 Other lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR18213713 HR-TB None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR502511 Sensitive lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
ERR702405 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
ERR736856 Sensitive lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR502510 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR29050859 Other lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4797184 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4798504 RR-TB lineage3 None
SRR3675248 Other lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None