lineage | Count |
---|---|
lineage1.2.2.2 | 5 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
75 | |
lineage4.3 | 1 |
lineage4.9 | 3 |
lineage2.2 | 1 |
La2 | 1 |
lineage3.1.2 | 1 |
lineage4 | 3 |
La3 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 96 |
ID | Drug resistance | Lineage | Country iso2 | SRR22251303 | HR-TB | lineage1.2.2.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR22251436 | HR-TB | lineage1.2.2.2 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None | ERR1035239 | HR-TB | None | ERR158583 | HR-TB | None | ERR212033 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675456 | HR-TB | None | ERR212001 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675383 | HR-TB | None | SRR3675502 | Other | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR4816466 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR1035162 | Other | None | SRR3675571 | HR-TB | None | ERR2693239 | HR-TB | None | SRR5341418 | Other | None | SRR6045555 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | ERR323036 | HR-TB | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6650288 | HR-TB | lineage1.2.2.2 | None | SRR6046460 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | ERR294266 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6797349 | HR-TB | lineage1.2.2.2 | None | ERR5311090 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323063 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR067681 | HR-TB | None | ERR1035122 | Sensitive | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3439432 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR3797036 | HR-TB | None | ERR3797083 | HR-TB | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR3797043 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4810741 | HR-TB | None | ERR736835 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358837 | HR-TB | None | ERR736865 | HR-TB | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR8976043 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1169306 | Other | None | SRR1174897 | HR-TB | None | SRR15316010 | Sensitive | lineage4 | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR21709332 | HR-TB | lineage1.2.2.2 | None |
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