Rv3596c - c.1812C>T
Drug resistance types
3 Sensitive
1 RR-TB
14 HR-TB
8 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage6.3 | 6 |
| lineage4.9 | 18 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2.2.1 | 6 |
| lineage4.9;lineage9 | 2 |
| lineage6.1.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage1.1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| 4 | |
| lineage4.3.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage3 | 3 |
| La3;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 58 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1169194 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR502912 | Other | lineage2.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR29093909 | Other | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR28119811 | Other | lineage2.2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR17658572 | Sensitive | lineage1.1.2 | None | SRR29097037 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR13265798 | Sensitive | lineage3 | None | SRR15368973 | Other | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4811105 | HR-TB | None | ERR4811075 | Other | None | ERR4798504 | RR-TB | lineage3 | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1165699 | Other | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR28119777 | Other | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None |
|---|
