EBG00000313339 - n.1823A>G
Drug resistance types
21 Sensitive
15 RR-TB
25 HR-TB
19 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 37 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.1 | 5 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9;lineage7 | 3 |
| La1.7;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2.2.1.1 | 3 |
| lineage2.2.1 | 5 |
| lineage4.3.4.2.1 | 3 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage3 | 3 |
| lineage1.1.2 | 2 |
| lineage4.3.4 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La2;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage6.1.1 | 2 |
| La1.8.1 | 1 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage1.2.1.2.1 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage6.1.2 | 1 |
| 1 | |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1180226 | HR-TB | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6045347 | Other | lineage4.9 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR3797019 | Other | La1.8.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR5341373 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR11465514 | MDR-TB | lineage4.1.1.1 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR9125132 | Other | lineage1.2.1.2.1 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR1510061 | Other | lineage1.2.1.2.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR181887 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR11465579 | Sensitive | lineage4.3.4.1 | None | ERR181824 | MDR-TB | lineage4.9 | None | SRR28045234 | Sensitive | lineage1.1.2 | None | ERR987722 | MDR-TB | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4816322 | Other | lineage4.9 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None |
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