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SRA data
Rv3423c
- c.867G>C
Drug resistance types
0 Sensitive
0 RR-TB
5 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
9
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
La2;lineage4.9
1
lineage3.1.2.2
1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3
1
lineage4.6.3;lineage4.9
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
lineage2.1;lineage4.1.4;lineage4.9
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR323039
HR-TB
La2;lineage4.9
None
ERR3283018
HR-TB
lineage4.9
None
ERR3283042
Other
lineage4.9
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR4798648
MDR-TB
lineage3.1.2.2
None
ERR6359045
Other
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
None
SRR26159047
Other
lineage4.6.3;lineage4.9
None
SRR29096150
Other
lineage4.9
None
SRR29096410
Other
lineage4.9
None
Showing 1 to 10 of 16 entries
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