Rv0668 - c.1683C>G


Drug resistance types
47 Sensitive 19 RR-TB 79 HR-TB 46 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 90 Other
lineage Counts
lineage Count
La1.2.BCG 1
M.canetti;lineage2.1 1
lineage4.9 88
lineage4.2;lineage4.9 3
lineage2.2 4
lineage4.6.3;lineage4.9 2
lineage2.1;lineage4.1.1.1;lineage6.3 2
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9 22
La3;lineage4.9 9
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage2.2.1.2;lineage7 1
lineage2.1;lineage4.9;lineage6.3 2
lineage4.1.2.1 7
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.1.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage2.2.1 10
M.canetti;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.1;lineage4.3.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.7;lineage4.9 10
lineage4 4
lineage4.3.1;lineage4.9;lineage6 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.8 2
La1.7;M.canetti;lineage4.9 4
lineage3 2
lineage3.1.2.2 1
lineage4.2;lineage4.8.1;lineage4.9 2
M.canetti;lineage1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.1.2.1.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 3
lineage1.1.2 1
M.canetti;lineage4.9 4
lineage6.1.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
lineage2.2.1.1 3
lineage1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage7 5
La1.7.1 1
lineage4.7 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.9;lineage6.1.3 1
La1.8.1 1
La3;M.canetti;lineage4.9 1
lineage4.4.1.1.1 1
M.canetti;lineage2.1;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage4.9 5
La2;lineage2.2 1
lineage2;lineage4.9 1
lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage4.2 1
M.canetti;lineage2.2 3
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.3.4 1
La3;lineage4 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
lineage2.2.1;lineage4.9 2
lineage4.1.1.3 1
La1.2;La1.8.1 1
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
lineage6.1.2 1
spoligotype Counts
spoligotype Count
None 286
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798262 HR-TB La1.2.BCG None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1181402 Sensitive lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4769497 Other La1;lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR176778 HR-TB lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR6046878 Other lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1180406 Sensitive lineage4.9 None
ERR3468607 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR8665994 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6045053 Other lineage4 None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR6359069 Sensitive lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675280 RR-TB lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1181349 Sensitive lineage4 None
ERR4819877 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4798139 RR-TB lineage1.1.2 None
SRR3675441 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR1023236 Other lineage6.1.3 None
SRR3675488 Other La1.7;lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR29097066 Sensitive lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675487 Other M.canetti;lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR7496523 Other lineage4.7 None
SRR1180312 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR3797023 HR-TB La1.8.1 None
ERR4819241 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1180300 Sensitive lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1180399 Sensitive lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SAMN02414850 Other lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR3283018 HR-TB lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180355 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR3675243 Other lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3275196 Other lineage2.2.1 nl
ERR4815471 Sensitive lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4818710 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR3675482 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
SRR1166821 Other lineage4.1.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR3675269 RR-TB lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736856 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR3675461 RR-TB lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR4798504 RR-TB lineage3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR12708392 Other lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR29096150 Other lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9787030 RR-TB lineage6.1.2 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None