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SRA data
Rv1854c
- c.129C>T
Drug resistance types
0 Sensitive
0 RR-TB
8 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
3 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
4
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage4.3.2;lineage4.9
1
lineage4.9;lineage6.3
1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
1
La2;lineage4.9
1
lineage2.1;lineage4.9
1
lineage3.1.2.2
1
lineage4.6.3;lineage4.9
1
lineage4.9;lineage9
1
Showing 1 to 10 of 13 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
17
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR323039
HR-TB
La2;lineage4.9
None
ERR323053
MDR-TB
La2;lineage4.9;lineage9
None
ERR4798648
MDR-TB
lineage3.1.2.2
None
ERR502524
HR-TB
lineage4.9;lineage6.3
None
Showing 1 to 10 of 17 entries
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