lineage | Count |
---|---|
lineage4.1 | 2 |
89 | |
lineage4.9 | 8 |
lineage2.2.1 | 2 |
lineage4 | 3 |
lineage3.1 | 2 |
La2 | 1 |
lineage4.7 | 1 |
lineage4.1.2.1 | 2 |
La1 | 1 |
lineage3.1.2 | 1 |
lineage4.1.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
lineage4.3 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | SRR3732719 | Other | lineage4.1 | None | SRR5341470 | HR-TB | None | ERR4816656 | HR-TB | None | ERR2693231 | Other | None | ERR4818929 | HR-TB | None | ERR2693254 | Other | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6046152 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6046046 | Other | None | SRR6045399 | Other | None | SRR6046397 | Other | None | ERR278594 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046514 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6325447 | HR-TB | None | ERR4831117 | HR-TB | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR294248 | HR-TB | None | ERR5311090 | HR-TB | None | SRR8217918 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496509 | Other | None | SRR7496523 | Other | lineage4.7 | None | ERR323038 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR323039 | HR-TB | None | ERR3283017 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3797016 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283024 | Other | None | ERR3468544 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797014 | Other | None | ERR387051 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797061 | Other | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797044 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4188350 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702406 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR736865 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9786604 | Other | None | ERR736835 | HR-TB | None | ERR9786617 | Other | lineage4.1.1 | None | SRR1172310 | HR-TB | None | ERR987722 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR19304036 | HR-TB | None | SRR15368973 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR12142341 | HR-TB | None | SRR13861322 | Other | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675456 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675234 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675555 | HR-TB | None | ERR2229175 | Other | lineage4.8 | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212123 | Other | None |
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