Rv3596c - c.114C>T


Drug resistance types
32 Sensitive 6 RR-TB 50 HR-TB 15 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 52 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
5
La3;lineage4.9 3
lineage2.2.2;lineage4 1
lineage4 4
lineage4.2;lineage4.9 3
lineage4.9;lineage6.3 5
lineage4.3.2;lineage4.9 1
La1.7;lineage4.9;lineage6 1
lineage4.9 56
lineage6.1.1 2
lineage2.2 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.9 1
lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 3
La2;lineage4.9 2
La1.7;lineage4.9 2
lineage4.8 1
La1.2;La1.8.1 1
M.canetti;lineage1 1
La1;lineage4.9 2
La1.7.1;lineage4.9 1
La1;lineage4.1.2 1
lineage4.1.2.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.1.1.1 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
La3;lineage2 1
M.canetti;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.2.1 7
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage9 2
lineage4.1.1.2 1
La1.7.1;La1.7.X-unk4 1
lineage3 2
lineage4.3.2.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.1.1 1
La1.2.BCG 1
lineage4.8;lineage4.9 2
lineage2.1 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.1;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
La2;lineage2.2 1
La1.8.1 1
lineage2.1;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage3.1.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.1.3.1 1
lineage4.2;lineage4.8.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 156
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
SRR28351339 MDR-TB lineage4 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR1172310 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR502511 Sensitive lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358979 Other lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR15014682 MDR-TB lineage4.8 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR10808805 Other La1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR3283021 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR24256310 HR-TB lineage4.1.2.1 None
SRR29017461 Other La3;lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR25827682 Other None
ERR9787197 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR19295647 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
ERR4407463 HR-TB None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR1063896 Sensitive None
SRR20969677 HR-TB La3;lineage2 None
SRR26399973 Other La3;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4798099 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR373945 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR1035122 Sensitive lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR5341299 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR28119805 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR4796254 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6046611 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR9119669 HR-TB lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1791747 Other La1.8.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR10315567 HR-TB lineage2.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675246 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None