Rv0005 - c.933C>T
Drug resistance types
41 Sensitive
1 RR-TB
47 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| 37 | |
| lineage4.9 | 26 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4 | 30 |
| La1.4 | 44 |
| lineage2.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1 | 1 |
| lineage2.1 | 1 |
| lineage4.8 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.1 | 5 |
| lineage4.1.2.1 | 1 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 3 |
| lineage3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 160 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR987722 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1174897 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172310 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR16278220 | Other | La1.4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14801749 | Sensitive | None | SRR1175508 | Other | lineage4.9 | None | SRR16278226 | Other | La1.4 | None | SRR16278221 | Other | La1.4 | None | SRR16278233 | Other | La1.4 | None | SRR16278223 | Other | La1.4 | None | SRR16278228 | Other | La1.4 | None | SRR16278225 | Other | La1.4 | None | SRR16278231 | Other | La1.4 | None | SRR16278239 | Other | La1.4 | None | SRR16278237 | Other | La1.4 | None | SRR16278236 | Other | La1.4 | None | SRR16278227 | Other | La1.4 | None | SRR16278229 | Other | La1.4 | None | SRR16278235 | Other | La1.4 | None | SRR16278242 | Other | La1.4 | None | SRR16278245 | Other | La1.4 | None | SRR16278232 | Other | La1.4 | None | SRR16278240 | Other | La1.4 | None | SRR16278241 | Other | La1.4 | None | SRR16278244 | Other | La1.4 | None | SRR16278248 | Other | La1.4 | None | SRR16278260 | Other | La1.4 | None | SRR16278247 | Other | La1.4 | None | SRR16278261 | Other | La1.4 | None | SRR16278256 | Other | La1.4 | None | SRR16278267 | Other | La1.4 | None | SRR16278268 | Other | La1.4 | None | SRR16278259 | Other | La1.4 | None | SRR16278273 | Other | La1.4 | None | SRR16278258 | Other | La1.4 | None | SRR16278263 | Other | La1.4 | None | SRR16278272 | Other | La1.4 | None | SRR16278281 | Other | La1.4 | None | SRR16278291 | Other | La1.4 | None | SRR16278277 | Other | La1.4 | None | SRR16278271 | Other | La1.4 | None | SRR16278274 | Other | La1.4 | None | SRR16278257 | Other | La1.4 | None | SRR16278276 | Other | La1.4 | None | SRR16278284 | Other | La1.4 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR16278278 | Other | La1.4 | None | SRR16278289 | Other | La1.4 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675477 | Other | lineage4.9 | None | SRR16278287 | Other | La1.4 | None | SRR16278285 | Other | La1.4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR176740 | HR-TB | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | ERR4816466 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2229338 | Sensitive | lineage4.8 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4819051 | Other | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR718196 | Sensitive | lineage1.1.1 | th | ERR4818536 | Other | lineage4.9 | None | SRR5341400 | HR-TB | lineage4 | None | ERR752275 | Sensitive | lineage1.1.1 | th | SRR5341373 | HR-TB | lineage4 | None | ERR752037 | Sensitive | lineage1.1.1 | th | SRR5341396 | Other | lineage4 | None | ERR768016 | Sensitive | lineage1.1.1 | th | ERR751790 | Sensitive | lineage1.1.1 | th | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341470 | HR-TB | None | ERR2517475 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046210 | Other | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR323039 | HR-TB | None | SRR6046482 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502943 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323053 | HR-TB | None | ERR323045 | HR-TB | None | ERR1034652 | Other | None | ERR067699 | HR-TB | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797048 | HR-TB | None | ERR3797067 | Other | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4812155 | Sensitive | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR736848 | HR-TB | None |
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