Rv2245 - c.420G>C


Drug resistance types
13 Sensitive 7 RR-TB 52 HR-TB 18 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 56 Other
lineage Counts
lineage Count
lineage4.9 41
lineage4.1.1.3 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.9 10
La1.7;lineage4.9 3
lineage4 1
lineage2.2.1.1 3
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.2 1
lineage2.2.1 4
lineage4.2;lineage4.9 3
lineage4.6.3;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage3 2
lineage4.9;lineage6.3 2
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
M.canetti;lineage4.2;lineage4.9 2
lineage4.8 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4 1
lineage4.9.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;lineage4.9 1
lineage4.9;lineage9 1
lineage3.1.2.2 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La2;lineage4.9;lineage9 1
La1;lineage4.9 1
M.canetti;lineage4.9 3
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
3
lineage4.6.2.2 4
lineage4.1;lineage4.8 1
lineage1.2.1.2 1
M.canetti;lineage2.2 2
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.2;lineage4.6.3;lineage4.9.1 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7.1;La1.7.X-unk4 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.6.4;lineage4.9 1
lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.6.4;lineage4.9 1
lineage4.1.2.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.4 1
lineage4.3.4.2.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 149
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045219 HR-TB lineage4.9 None
ERR11465665 Other lineage4.1.1.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3283011 Other La3;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR1181091 Other lineage2.2.1.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR4816656 Other lineage4.9 None
ERR473332 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6046485 Other lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR17832802 HR-TB lineage3 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283042 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR245758 Other lineage4.9.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675461 RR-TB lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR23961542 Other La1;lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR176751 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR212125 HR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786843 Other None
ERR11252612 Other La3;lineage4.9 None
ERR212001 HR-TB None
ERR176778 HR-TB lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR1063858 HR-TB lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR176779 HR-TB lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR176643 Other La3;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
ERR11252664 Other lineage2.2.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR987722 MDR-TB None
ERR212033 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4818929 HR-TB lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3797048 Other La3;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None