Rv3596c - c.909C>T
Drug resistance types
5 Sensitive
4 RR-TB
7 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.6.5 | 2 |
| lineage1.2.2.2 | 2 |
| lineage6.1.1 | 2 |
| lineage3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9 | 7 |
| lineage2.2.1.1 | 4 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 34 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR7070358 | Sensitive | lineage1.2.2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR29097026 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR29096745 | Sensitive | lineage1.2.2.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4816852 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR1180172 | Other | lineage2.2.1 | None |
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