Rv0006 - c.1284C>T
Drug resistance types
7 Sensitive
1 RR-TB
17 HR-TB
7 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 21 |
| lineage2.2 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| La3;lineage4.9 | 5 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.6.1.1 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| lineage4.9;lineage9 | 2 |
| La1.2;La1.8.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3 | 1 |
| lineage4.1.2.1 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| 1 | |
| lineage4.9;lineage6.3 | 2 |
| lineage4.2.2 | 1 |
| lineage6.1.1 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183111 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4798504 | RR-TB | lineage3 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR987722 | MDR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR15316227 | Sensitive | lineage4.2.2 | None | SRR29096410 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046046 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR3799304 | Other | lineage6.1.1 | None |
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