Rv3596c - c.1956C>T


Drug resistance types
73 Sensitive 4 RR-TB 47 HR-TB 13 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 57 Other
lineage Counts
lineage Count
La1.7;M.canetti;lineage4.9 3
lineage4.6.3;lineage4.9 1
La1.7;lineage4.9 7
lineage4.2;lineage4.9 2
lineage4.9 101
lineage2.2.1 8
lineage3 4
lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.1.1 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.4.1.1.1 1
lineage4 2
lineage2;lineage4.9 1
La3;M.canetti;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.8 2
lineage1;lineage4.9 1
La3;lineage4.9 6
La3;lineage4.3.4 1
lineage4.1.2.1 4
La1.7.1;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage2.2 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 3
La1.2 1
1
La1.8.1 1
lineage4.9;lineage7 1
lineage4.3.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9;lineage6 1
La1.7 1
lineage4.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
La2;lineage4.9 1
lineage4.9;lineage9 2
La1.7.1;La1.7.X-unk4 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage1.1.1 1
La1;lineage4.9 1
lineage1.1.2 2
M.canetti;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.3.4.2.1 2
lineage4.3.3 1
lineage2.2.1;lineage4.9 1
La1.2.BCG 1
lineage4.2;lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage3.1.2.1 1
La1.7;lineage3.1;lineage4 1
lineage3.1.2.2 1
La1.4 1
spoligotype Counts
spoligotype Count
None 195
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
SRR17832802 HR-TB lineage3 None
SRR6045217 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1049674 HR-TB lineage2.2.1 None
ERR926157 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR3675385 Other La1.7;lineage4.9 None
ERR9787014 Other lineage6.1.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR369158 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR1175487 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR1180420 Sensitive lineage4.9 None
SRR29050859 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR6044876 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR108471 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR3799304 Other lineage6.1.1 None
SRR6044835 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR1183111 HR-TB lineage4.9 None
ERR176740 Other lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961549 Other La1.2 None
SRR1238558 Other lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR181824 HR-TB lineage4.9 None
SRR5431730 Other La1.8.1 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
SRR1175513 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR926155 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR3675222 Other La1.7 None
ERR4808964 RR-TB lineage2.2.1 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1180300 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR9119669 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR363426 Sensitive lineage4.9 None
ERR212123 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR29096198 Sensitive lineage1.1.1 None
ERR176779 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR926154 Sensitive lineage4.9 None
ERR4798139 RR-TB lineage1.1.2 None
SRR29097066 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR29096150 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR3797086 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR29097026 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR7361995 Pre-XDR-TB lineage4.3.3 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR1915487 Other La1.2.BCG None
ERR349296 Sensitive lineage4.9 None
SRR29097037 Other lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
ERR3797029 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR25827728 HR-TB lineage1.1.2 None
ERR4815022 Other lineage3.1.2.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR2513259 Other lineage3 None
SRR3675267 Other La1.7;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR363437 Sensitive lineage4.9 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR11662694 Other lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR161037 Other lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR349299 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1063849 HR-TB lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR16278274 Other La1.4 None
ERR212125 HR-TB lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None