lineage | Count |
---|---|
49 | |
lineage4.9;lineage4.6.3 | 1 |
lineage4.9 | 30 |
lineage4.1.1.2 | 1 |
lineage4.3 | 1 |
lineage4 | 19 |
lineage2.2.1 | 4 |
La2 | 1 |
lineage4.1.2 | 1 |
lineage3 | 3 |
lineage1.1.2 | 1 |
lineage3.1.2 | 1 |
La1.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
La1.7.1 | 1 |
lineage2.2.1.1 | 2 |
lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 118 |
ID | Drug resistance | Lineage | Country iso2 | SRR5341470 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675550 | Other | None | ERR4816466 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818929 | HR-TB | None | SRR8692807 | Other | lineage4.9 | None | SRR8692887 | Other | None | ERR158583 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675571 | HR-TB | None | SRR5341418 | Other | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045519 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046210 | Other | lineage4 | None | SRR6046397 | Other | None | SRR6045399 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046824 | HR-TB | None | SRR6046482 | HR-TB | None | ERR3283014 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR294266 | HR-TB | None | ERR323039 | HR-TB | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3439432 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR387051 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR4800182 | Sensitive | lineage3 | None | ERR473332 | Other | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR987722 | HR-TB | None | ERR4811493 | HR-TB | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR9634265 | Sensitive | None | ERR6198317 | Other | La1.2 | None | ERR6358979 | Other | None | SRR1167384 | Other | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR11418321 | Other | La1.7.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1174897 | HR-TB | None | SRR13837806 | Sensitive | lineage4.9 | None | SRR13837436 | Sensitive | lineage4.9 | None | SRR13837437 | Sensitive | lineage4.9 | None | SRR13837438 | Sensitive | lineage4.9 | None | SRR13837553 | Sensitive | lineage4.9 | None | SRR13837809 | Sensitive | lineage4.9 | None | SRR13837807 | Sensitive | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13837653 | Sensitive | lineage4.9 | None | SRR13837930 | Sensitive | lineage4.9 | None | SRR13861179 | Other | lineage4.9 | None | SRR13861515 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13837922 | Sensitive | lineage4.9 | None | SRR13837919 | Sensitive | lineage4.9 | None | SRR13837921 | Sensitive | lineage4.9 | None | SRR13837923 | Sensitive | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861348 | Other | lineage4.9 | None | SRR13861719 | Sensitive | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861595 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR14801749 | Sensitive | None | SRR17832802 | HR-TB | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None |
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