Rv0001 - c.633T>C
Drug resistance types
5 Sensitive
0 RR-TB
11 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 4 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage2.2.1 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.9 | 6 |
| 1 | |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage3 | 1 |
| M.canetti;lineage1 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| La1.2.BCG | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 34 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR3675222 | Other | La1.7 | None |
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675385 | Other | La1.7;lineage4.9 | None |
| ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| ERR4796929 | Sensitive | lineage4.9 | None |
| ERR234659 | Other | None | |
| SRR6045795 | Sensitive | lineage2.2.1 | None |
| ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None |
| SRR3675501 | Other | La1.7;lineage4.9 | None |
| SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
| SRR3675492 | Other | La1.7;lineage4.9 | None |
| ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
| ERR4830353 | Other | La1.7 | None |
| SRR3675267 | Other | La1.7;lineage4.9 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| SRR20632814 | Sensitive | lineage4.9 | None |
| SRR28044873 | Pre-XDR-TB | lineage3 | None |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| ERR3283042 | Other | lineage4.9 | None |
| SRR10809074 | Sensitive | lineage4.9 | None |
| SRR11662694 | Other | lineage4.9 | None |
| SRR15014655 | Other | M.canetti;lineage1 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None |
| ERR4797193 | HR-TB | lineage1.1.2 | None |
| ERR3283018 | HR-TB | lineage4.9 | None |
| ERR4798262 | HR-TB | La1.2.BCG | None |
