Rv0006 - c.1539C>T
Drug resistance types
25 Sensitive
1 RR-TB
14 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 36 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage2.2.1 | 5 |
| lineage4.8;lineage4.9 | 2 |
| La1.7 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| 1 | |
| La1.7;lineage4.9 | 5 |
| lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.1.2 | 2 |
| lineage4.4.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR1035122 | Sensitive | lineage4.9 | None |
| SRR12416842 | HR-TB | lineage4.9 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
| ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None |
| SRR5341299 | HR-TB | lineage4.9 | None |
| SRR2010299 | MDR-TB | lineage2.2.1 | None |
| ERR4024991 | Other | lineage4.8;lineage4.9 | None |
| ERR4811493 | HR-TB | lineage4.9 | None |
| ERR4797313 | Sensitive | lineage2.2.1 | None |
| ERR6866022 | Other | lineage4.8;lineage4.9 | None |
| ERR323062 | Sensitive | lineage4.9 | None |
| SRR3675222 | Other | La1.7 | None |
| ERR363453 | Sensitive | lineage4.9 | None |
| SRR9971114 | Other | lineage2.2.1 | None |
| ERR736872 | HR-TB | lineage4.9 | None |
| ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
| ERR1063896 | Sensitive | None | |
| SRR1159378 | Other | lineage4.9 | None |
| SRR3675492 | Other | La1.7;lineage4.9 | None |
| ERR4830353 | Other | La1.7 | None |
| ERR4798099 | Other | lineage4.9 | None |
| SRR3675267 | Other | La1.7;lineage4.9 | None |
| SRR5341345 | Sensitive | lineage4.9 | None |
| SRR14802079 | MDR-TB | lineage4.2.1 | None |
| ERR4596910 | Sensitive | lineage4.9 | None |
| ERR245794 | HR-TB | lineage4.3.4.2.1 | None |
| SRR3675488 | Other | La1.7;lineage4.9 | None |
| SRR6045706 | Sensitive | lineage4.9 | None |
| SRR29097054 | Sensitive | lineage4.9 | None |
| ERR323085 | Sensitive | lineage4.9 | None |
| ERR736834 | Sensitive | lineage4.9 | None |
| SRR5341469 | HR-TB | lineage4.9 | None |
| ERR4797264 | Sensitive | lineage4.9 | None |
| SRR3675385 | Other | La1.7;lineage4.9 | None |
| ERR502511 | Sensitive | lineage4.9 | None |
| ERR502943 | Sensitive | lineage2.2.1;lineage4 | None |
| SRR5535933 | Other | lineage4.9 | None |
| SRR3675501 | Other | La1.7;lineage4.9 | None |
| ERR702405 | Sensitive | lineage4.9 | None |
| SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR22528583 | Sensitive | lineage4.1.2.1 | None |
| SRR12708407 | HR-TB | lineage4.3.2.1 | None |
| SRR5341384 | HR-TB | lineage4.9 | None |
| ERR502510 | Sensitive | lineage4.9 | None |
| SRR16156817 | Other | lineage4.9 | None |
| ERR400345 | Other | lineage4.9 | None |
| SRR6046245 | Other | lineage4.9 | None |
| ERR400336 | Sensitive | lineage4.9 | None |
| ERR751326 | Other | lineage4.9 | None |
| SRR5341303 | Sensitive | lineage4.9 | None |
| SRR5341308 | Sensitive | lineage4.9 | None |
| ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
| SRR12882664 | Sensitive | lineage3 | None |
| SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None |
| SRR1158918 | Sensitive | lineage4.9 | None |
| ERR137286 | Other | lineage4.9 | None |
| ERR323066 | Sensitive | lineage4.9 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| SRR5341300 | HR-TB | lineage4.9 | None |
| ERR124636 | Sensitive | lineage4.9 | None |
| SRR9970981 | RR-TB | lineage4.3.2.1 | None |
| ERR400326 | Other | lineage4.9 | None |
| SRR20970043 | MDR-TB | lineage2.2.1 | None |
| ERR11067228 | Other | lineage4.1.2 | None |
| DRR188519 | Other | lineage4.4.2 | None |
| ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
| SRR5341453 | Other | lineage4.9 | None |
