lineage | Count |
---|---|
lineage6.3;lineage2.2.1 | 1 |
lineage4.9;La3 | 1 |
lineage4.1.2.1 | 3 |
lineage4.1.1 | 1 |
54 | |
lineage4.3 | 1 |
lineage2.2 | 1 |
lineage4.8 | 1 |
lineage2.2.1 | 1 |
lineage4.9 | 3 |
lineage2 | 2 |
lineage4 | 1 |
La3 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 72 |
ID | Drug resistance | Lineage | Country iso2 | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675488 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR2229377 | Other | lineage4.8 | None | ERR234659 | HR-TB | None | ERR4818615 | Other | None | SRR6045526 | HR-TB | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR6046492 | Other | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | ERR4830353 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR7535086 | Other | None | ERR4831117 | HR-TB | None | SRR6789626 | Other | None | ERR502532 | HR-TB | None | ERR3283027 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR323043 | HR-TB | None | ERR4407463 | HR-TB | None | ERR3283036 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736867 | HR-TB | None | ERR702404 | HR-TB | None | ERR5336148 | Other | None | ERR702406 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR736874 | HR-TB | None | ERR9787197 | Other | None | ERR9786604 | Other | None | ERR9786671 | Other | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1172951 | Other | None | SRR1169249 | Other | La3 | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173629 | Other | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1184380 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR19304036 | HR-TB | None | SRR15368973 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR20969677 | HR-TB | lineage2 | None |
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