lineage | Count |
---|---|
lineage3 | 1 |
57 | |
lineage4 | 3 |
lineage2.2.1 | 6 |
lineage4.1.2.1 | 7 |
lineage1.1 | 1 |
lineage4.2.1.1 | 1 |
lineage3.1 | 2 |
lineage4.3.3 | 3 |
lineage4.9 | 11 |
La1 | 1 |
lineage4.1.2.1.1 | 1 |
lineage4.3.2 | 1 |
lineage4.8 | 2 |
lineage4.4.1.1 | 1 |
lineage4.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 101 |
ID | Drug resistance | Lineage | Country iso2 | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045555 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045952 | HR-TB | None | ERR4830353 | Other | None | SRR6046482 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | ERR502889 | Other | None | ERR294266 | HR-TB | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323041 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323055 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283025 | HR-TB | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR4188350 | HR-TB | None | ERR3797016 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4798406 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR6358837 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675222 | Other | None | SRR3675501 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675550 | Other | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR1035162 | Other | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4819280 | Sensitive | lineage4 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341418 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR1035138 | MDR-TB | None | ERR1023509 | Other | None |
---|