Rv0006 - c.753T>C
Drug resistance types
32 Sensitive
2 RR-TB
81 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| 111 | |
| lineage4.1.2.1 | 8 |
| lineage4.3.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4 | 7 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 7 |
| lineage4.5 | 2 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1 | 2 |
| lineage2.2.1 | 2 |
| lineage1.1 | 1 |
| lineage2.2 | 1 |
| La1 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 153 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR7451300 | Sensitive | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR736839 | Other | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR8976043 | HR-TB | None | ERR7451301 | Sensitive | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9125480 | Sensitive | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1169306 | Other | None | SRR1174897 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR13861304 | Other | lineage4.9 | None | SRR16058668 | Sensitive | None | SRR13861611 | Sensitive | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR24061600 | Sensitive | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR22179528 | Sensitive | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR24061598 | Sensitive | None | SRR24061599 | Sensitive | None | SRR3675502 | Other | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | SRR6325445 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | ERR181744 | HR-TB | None | ERR4815361 | Sensitive | None | SRR3675486 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675545 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816019 | Sensitive | None | ERR4817037 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | SRR3675550 | Other | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817181 | Sensitive | None | ERR4816656 | HR-TB | None | SRR5818653 | Sensitive | dj | ERR1035162 | Other | None | SRR5818614 | Sensitive | dj | SRR5818661 | Sensitive | dj | SRR5818668 | Sensitive | dj | SRR5818567 | Sensitive | dj | SRR5818652 | Sensitive | dj | SRR5818676 | Sensitive | dj | ERR2693239 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341418 | Other | None | SRR5341470 | HR-TB | None | ERR4821046 | Sensitive | None | SRR5007188 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | ERR4819927 | Sensitive | None | SRR6045327 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR5818605 | Sensitive | None | SRR5818685 | Sensitive | None | SRR6045952 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045399 | Other | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325442 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6325444 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323036 | HR-TB | None | ERR294248 | HR-TB | None | ERR5311099 | HR-TB | None | ERR502889 | Other | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7496509 | Other | None | ERR3439432 | Other | None | ERR323041 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323055 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR3283028 | Other | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3597005 | Sensitive | None | ERR3597003 | Sensitive | None | ERR3597001 | Sensitive | None | ERR3597002 | Sensitive | None | ERR3597007 | Sensitive | None | ERR403298 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4811022 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None |
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