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SRA data
Rv3596c
- c.1944C>T
Drug resistance types
5 Sensitive
0 RR-TB
1 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
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lineage
Count
lineage
Count
La1.7;lineage4.9
4
lineage4.9
2
lineage4.8.1
2
La1.7;M.canetti;lineage4.9
2
lineage3
1
lineage4.3.4.1
1
lineage4.3.4.2.1
1
lineage1.2.1.2
1
lineage1.2.1.2.1
1
lineage4.1.2.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
16
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11465232
Sensitive
lineage4.1.2.1
None
ERR11465235
Sensitive
lineage4.3.4.2.1
None
ERR11465279
Sensitive
lineage4.3.4.1
None
ERR400529
Other
lineage3
None
ERR6866410
Sensitive
lineage4.9
None
ERR779852
Sensitive
lineage4.9
None
SRR20969475
Other
lineage1.2.1.2
None
SRR29055689
MDR-TB
lineage4.8.1
None
SRR29055924
MDR-TB
lineage4.8.1
None
SRR30182790
HR-TB
lineage1.2.1.2.1
None
Showing 1 to 10 of 16 entries
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