lineage | Count |
---|---|
39 | |
lineage4.9 | 36 |
lineage2.2.1.2 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 4 |
lineage4.8 | 4 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage2.2.1 | 3 |
lineage7;lineage2.2.1.2 | 1 |
lineage4;lineage2.2 | 1 |
lineage4 | 12 |
lineage4.1.2 | 2 |
lineage4;lineage2 | 1 |
lineage4.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.3.4.1 | 2 |
lineage4.3.2.1 | 1 |
La1.2 | 1 |
spoligotype | Count |
---|---|
None | 113 |
ID | Drug resistance | Lineage | Country iso2 | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR6866639 | Other | None | SRR1181368 | Other | lineage4.9 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR14782405 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR8692899 | Other | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | ERR4815310 | Other | None | SRR8692822 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | SRR4035736 | Sensitive | lineage4.1.2 | None | SRR3675510 | Other | None | ERR2229655 | Other | lineage4.8 | None | ERR4816762 | Other | lineage4;lineage2 | None | SRR3675456 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675555 | HR-TB | None | ERR4815815 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818124 | Sensitive | lineage4.9 | None | SRR5341456 | Other | None | ERR2660539 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6046046 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6046210 | Other | lineage4 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4830353 | Other | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7496471 | Sensitive | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR3797048 | HR-TB | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR3283014 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR387051 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None |
---|