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SRA data
Rv0001
- c.609C>A
Drug resistance types
1 Sensitive
1 RR-TB
2 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
La1.7;lineage4.9
2
La1.7;M.canetti;lineage4.9
2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
1
La1.7
1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
1
M.canetti;lineage4.9
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
13
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067712
Sensitive
lineage4.9
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR4830353
Other
La1.7
None
SRR11662694
Other
lineage4.9
None
SRR3675267
Other
La1.7;lineage4.9
None
SRR3675461
RR-TB
lineage4.9
None
SRR3675492
Other
La1.7;lineage4.9
None
Showing 1 to 10 of 13 entries
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