Rv0006 - c.495G>C


Drug resistance types
4 Sensitive 2 RR-TB 19 HR-TB 4 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 103 Other
lineage Counts
lineage Count
lineage4.9 22
La1.7;lineage4.9 6
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 6
La1.7;M.canetti;lineage4.9 2
13
lineage4.9;lineage6.3 7
lineage2.1;lineage4.9;lineage6.3 7
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 2
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
La3;lineage2 1
lineage6.3.1 1
lineage2.1;lineage4.9 14
La3;lineage1.1.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4 2
lineage1;lineage4.9 1
lineage4.3.4.2 1
La3 2
M.canetti;lineage2.1;lineage4.9 2
La3;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage7 2
lineage2.1 3
lineage2.2.1 4
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
La1.7.X-unk4;lineage4.9 1
lineage4.7 1
lineage2.1;lineage6.3 2
La1.7 1
lineage4.3.2.1 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.7.1;lineage4.9 1
lineage3 1
lineage4.8.1 1
lineage4.3.4.2.1 1
La1.7;lineage3.1;lineage4 1
lineage4.1.1.1 1
lineage4.3.2 1
lineage4.1.1.3 1
lineage4.2.1 1
M.canetti;lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 134
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1184294 Other lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6046046 Other lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2027263 Other lineage4 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR29096900 Sensitive lineage4.3.4.2 None
SRR1165699 Other lineage4.9 None
SRR7535086 Other None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117709 Other None
SRR1172817 Other La3 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR7496472 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR1184381 MDR-TB None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR4819781 Other lineage2.2.1 None
ERR9786604 Other None
SRR3675572 Other None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
SRR3675275 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR4830353 Other La1.7 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4800341 Other lineage3 None
ERR702406 Other lineage2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3804155 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
ERR9787197 Other None
ERR4814352 Other lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1173633 Other lineage4.9 None
SRR1173363 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR3797069 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045053 Other lineage4 None
SRR3675492 Other La1.7;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4815604 Other None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR176793 Other lineage4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
ERR11466044 Other lineage4.1.1.3 None
ERR108471 HR-TB lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR28119777 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4769452 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR6044835 Other lineage4.9 None