Rv0005 - c.984G>C


Drug resistance types
31 Sensitive 17 RR-TB 82 HR-TB 47 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 79 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.6;La3;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.8 1
La2;lineage4.9 1
lineage4.3.2.1 1
lineage4.9 57
M.canetti;lineage4.9 3
lineage2.2.2 1
La3;lineage4.9 13
lineage2.2.1 8
lineage4.1.1.3 3
La3;lineage4.3.4 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.9 6
M.canetti;lineage2.1;lineage4.9 24
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.3.3 2
lineage2.2.1.1 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.7;lineage4.9 7
3
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9;lineage7 4
lineage4.1.1.3;lineage4.9 2
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.2 3
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.1.2.1 8
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.9 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;M.canetti;lineage2.1;lineage4.9 12
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.2;La1.8.1 1
lineage4.6.2.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
La1.8.1 3
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.7.1;lineage4.9 1
lineage4.5 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
lineage2.2 3
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage1.1.1 1
La1.7;M.canetti;lineage4.9 2
lineage4.2;lineage4.9 3
La1.7.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.6;lineage4 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.4 1
La3;lineage4 1
lineage4 1
lineage4.6.1.1 2
lineage1.2.2.2 1
La1.7.1;La1.7.X-unk4 1
La1;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
lineage1.2.1.2.1 1
lineage6.1.2 1
La1.7;lineage4.2 1
lineage1.1 1
M.canetti;lineage2.1;lineage3 1
lineage4.1;lineage4.8 1
lineage1.2.1.2 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 260
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR6359066 HR-TB lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283011 Other La3;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363445 Other lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4769452 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR1180147 Other lineage2.2.1.1 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR11252664 Other lineage2.2.1 None
ERR212001 HR-TB None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR29231479 RR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3468607 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR369151 Other lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR6046046 Other lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR1166821 Other lineage4.1.2.1 None
SRR1165628 Other La3;lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736856 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR363449 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR9119096 RR-TB lineage4.3.3 None
SRR14066533 Sensitive lineage1.1.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR3275196 Other lineage2.2.1 nl
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
ERR3283028 Other La3;lineage4 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8665994 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR3797083 RR-TB lineage4.9 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR4797129 Sensitive lineage1.2.2.2 in
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR5917710 Other lineage4.1.2.1 None
ERR161037 Other lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR23961542 Other La1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR9787030 RR-TB lineage6.1.2 None
SRR23961559 Other La1.7;lineage4.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR736831 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9786843 Other None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
ERR212033 Other lineage4.9 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR13861266 Sensitive lineage4.9 None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR3797023 HR-TB La1.8.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR4811030 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797067 Other La1.8.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675482 Other lineage4.9 None
ERR13265003 Sensitive lineage2.2.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR2693228 RR-TB lineage4.9 None