Rv0005 - c.984G>C


Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
35 Sensitive 12 RR-TB 83 HR-TB 45 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 81 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 24
lineage4.9 59
lineage4.2;lineage4.9 3
La1.6;lineage4 1
M.canetti;lineage2.2 3
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage2.2.1 10
La3;M.canetti;lineage4.9 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 12
La3;lineage4 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7.X-unk4;lineage4.9 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage4.9 7
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 6
La3;lineage4.9 13
La1.6;La3;lineage4.9 2
lineage4.4.1.2 1
La1.8.1 4
lineage4.1.2.1 8
lineage4.3.2 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage4.1.2.1.1 1
lineage4.6.1.1 2
lineage1.2.1.2.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La1;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage3 1
4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9;lineage7 4
lineage4.1.1.3;lineage4.9 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.3.4 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.1.1.3 3
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La2;lineage4.9 1
lineage4.3.2.1 1
lineage1.1 1
La1.7.1;La1.7.X-unk4 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.5 1
La1.7.1;lineage4.9 1
lineage2.2 3
lineage1.1.1 1
M.canetti;lineage4.9 3
lineage2.2.1.1 1
lineage1.2.2.2 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
lineage2.1;lineage4.9;lineage7 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La1.7;M.canetti;lineage4.9 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.8 1
lineage6 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.6.2.2 2
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1.1;lineage4.9 1
lineage4.1.1.1 1
La1.7.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La1.7;lineage4.2 1
spoligotype Counts
spoligotype Count
None 260
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044815 Other lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1180137 Other lineage2.2.1 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3283028 Other La3;lineage4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR8665994 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR13265990 Sensitive lineage2.2.1 None
ERR212123 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR6046593 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797023 HR-TB La1.8.1 None
ERR5917710 Other lineage4.1.2.1 None
ERR772255 MDR-TB lineage4.3.2 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
SRR1791696 Other La1.8.1 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797064 Other La3;lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363445 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7240033 Other La1.8.1 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR13265291 Sensitive lineage2.2.1 None
SRR3675494 RR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR9786843 Other None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468607 Other lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797083 RR-TB lineage4.9 None
SRR6045053 Other lineage4 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1163221 MDR-TB lineage4.1.2.1 None
ERR2693228 RR-TB lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3077978 Other lineage1.1 None
ERR4769521 RR-TB lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR161037 Other lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR29231479 RR-TB lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR8976043 HR-TB lineage2.2 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR13861266 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046382 Sensitive lineage2.2.1 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4797129 Sensitive lineage1.2.2.2 in
ERR6359082 Other lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11252664 Other lineage2.2.1 None
ERR212001 HR-TB None
ERR212033 Other lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675243 Other lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1167384 Other La3;lineage4.9 None
SRR1640750 Other None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046611 Sensitive lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR11252736 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR369151 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR3675482 Other lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
SRR1166821 Other lineage4.1.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3797067 Other La1.8.1 None
ERR4810624 HR-TB lineage2.2.1 None
ERR4769450 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
ERR9787030 Sensitive lineage6 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR9786525 Other lineage4 None
ERR13265003 Sensitive lineage2.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2229143 RR-TB lineage4.9 None
SRR12006550 Sensitive None
ERR363509 Sensitive lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR212138 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6325442 HR-TB lineage4.1.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
SRR6325447 HR-TB lineage4.1.1.1 None
SRR14782405 HR-TB lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736831 Other lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None