Rv0005 - c.984G>C


Drug resistance types
75 Sensitive 3 RR-TB 127 HR-TB 12 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 80 Other
lineage Counts
lineage Count
lineage2.2 8
110
lineage4.1.2.1 10
lineage4.8;lineage4.1 1
lineage6 1
lineage4.6.1.1 2
lineage4.3.3 2
lineage4.6.2.2 2
lineage2.2.1 11
lineage4.4.1.1 2
lineage4 67
La3 1
lineage4.9 54
lineage2.2.1.1 1
lineage1.2.1.2 1
La1.8.1 3
lineage4.5 2
lineage1.1.1 1
lineage1.2.1.2.1 1
lineage4.1 2
lineage4.9;La1 1
lineage4;lineage2.2 1
lineage4.2;La1.7 1
lineage4.1.1.3 2
lineage4.3.4 2
lineage3;lineage2.1 1
lineage4.3 1
lineage3 1
lineage4.1.1 1
lineage4.2.1 1
lineage1.1 1
lineage3.1 2
lineage1.2.2.2 1
lineage4.4.1.2 1
La1 1
lineage4.1.2.1.1 1
lineage4.3.2 1
spoligotype Counts
spoligotype Count
None 302
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8976043 HR-TB None
SRR1163221 HR-TB lineage4.1.2.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786843 Other None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787030 Sensitive lineage6 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR9119096 Other lineage4.3.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119669 HR-TB None
SRR1165506 Other lineage4.1.2.1 None
SRR1165584 Other lineage4.1.2.1 None
SRR1166821 HR-TB lineage4.1.2.1 None
SRR1167055 Other lineage4.1.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1173767 HR-TB lineage4.4.1.1 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1180137 Other lineage2.2.1 None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1169306 Other None
SRR1173453 Other lineage4.4.1.1 None
SRR1175496 HR-TB lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181020 Other lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR1183049 Other lineage2.2 None
SRR1791696 Other La1.8.1 None
SRR13423544 Other lineage4.5 None
SRR13837684 Sensitive lineage4.9 None
SRR13861151 RR-TB lineage4.9 None
SRR13861261 Sensitive lineage4.9 None
SRR13861266 Sensitive lineage4.9 None
SRR13861413 Sensitive lineage4.9 None
SRR13861415 Other lineage4.9 None
SRR13861528 HR-TB lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861686 RR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR1510066 Other lineage1.2.1.2.1 None
SRR13837544 Sensitive lineage4.9 None
SRR13861556 Other lineage4.9 None
SRR13861573 Other lineage4.9 None
SRR13861611 Sensitive lineage4.9 None
SRR13861699 Sensitive lineage4.9 None
SRR14782405 HR-TB None
SRR1640750 HR-TB None
SRR18910194 HR-TB lineage2.2 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR12708416 Sensitive lineage4.1 None
SRR8692807 Other lineage4.9 None
SRR8692897 Other lineage4.9 None
SRR23961542 Other lineage4.9;La1 None
SRR8692905 HR-TB None
SRR8692825 Other lineage4.9 None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692887 Other None
ERR176779 HR-TB None
ERR176778 HR-TB None
SRR23961559 Other lineage4.2;La1.7 None
SRR3675464 HR-TB lineage4.1 None
SRR3675477 Other lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR6325445 HR-TB None
ERR1035239 HR-TB None
ERR161033 HR-TB None
SRR3675482 HR-TB None
SRR3675488 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
ERR181744 HR-TB None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
SRR3675234 Other None
SRR3675229 Other lineage4 None
SRR3675501 HR-TB None
SRR3675222 Other None
ERR181824 HR-TB lineage4 None
SRR3675456 HR-TB None
SRR3675266 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675270 HR-TB None
SRR3675284 HR-TB lineage4.9 None
ERR176651 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675279 Other None
ERR181887 HR-TB None
ERR176643 HR-TB None
SRR3675383 HR-TB None
SRR3675387 Sensitive None
ERR212123 Other None
SRR3675455 Sensitive lineage4 None
SRR3675514 Sensitive lineage4.9 None
SRR3675522 Other None
ERR212033 HR-TB None
SRR3675555 HR-TB None
SRR3675558 HR-TB None
ERR176751 HR-TB None
SRR3675510 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675545 HR-TB None
ERR212001 HR-TB None
SRR3675571 HR-TB None
ERR212125 HR-TB lineage4 None
ERR212138 HR-TB lineage4 None
ERR4817998 Other lineage3 None
ERR4818710 Sensitive lineage4.9 None
ERR4816466 HR-TB None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR3275196 Other lineage2.2.1 nl
ERR4819462 Other lineage4 None
ERR2229143 Other lineage4.1.1 None
ERR4818536 Other lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR1035138 MDR-TB None
ERR6359082 Other lineage4.9 None
ERR2693239 HR-TB None
ERR2446563 Other lineage2.2.1 nl
ERR2693231 Other None
ERR2693254 Other None
ERR2693230 Other None
SRR6045503 HR-TB None
SRR6045519 HR-TB None
ERR2693257 Other None
ERR278594 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6045832 HR-TB lineage4.9 None
SRR6045706 Sensitive lineage4 None
SRR6045795 HR-TB lineage2.2.1 None
ERR2693232 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6045952 HR-TB None
SRR6044875 HR-TB lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044835 Sensitive lineage4 None
SRR6045053 Other None
SRR6046210 Other lineage4 None
SRR6046046 Other None
SRR6046245 Other lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046253 HR-TB lineage4.9 None
ERR4830353 Other None
SRR6046385 Other lineage4.9 None
SRR6046259 Sensitive lineage4.9 None
SRR6325444 HR-TB None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046611 HR-TB lineage4.9 None
SRR6046514 HR-TB None
SRR6325448 HR-TB None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6325447 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6046897 Sensitive lineage4 None
ERR4831546 HR-TB lineage2.2 None
ERR3077978 Other lineage1.1 None
ERR323034 HR-TB lineage3.1 None
ERR485006 HR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR4797129 Sensitive lineage1.2.2.2 in
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
ERR323037 HR-TB lineage4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR294266 HR-TB None
ERR294248 HR-TB None
ERR323036 HR-TB None
ERR323038 HR-TB None
ERR502943 HR-TB None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
ERR323055 HR-TB None
ERR323041 HR-TB None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323054 HR-TB lineage3.1 None
ERR323063 HR-TB None
ERR1063855 Other lineage4 None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1023525 HR-TB lineage4 None
ERR1063839 HR-TB lineage2.2 None
ERR1034652 Other None
ERR1063862 HR-TB None
ERR1063857 HR-TB None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR108471 HR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283010 Other La1 None
ERR3283017 HR-TB None
ERR3283021 HR-TB None
ERR3283028 Other None
ERR3283025 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283024 Other None
ERR3283032 HR-TB None
ERR3283031 HR-TB None
ERR3445501 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3468544 HR-TB None
ERR349265 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR363498 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR3797016 HR-TB None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797014 Other None
ERR3797017 Other None
ERR3797044 Other None
ERR3797023 HR-TB La1.8.1 None
ERR3797047 HR-TB lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797067 Other La1.8.1 None
ERR3797086 Other lineage4.9 None
ERR3797061 Other None
ERR3797063 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797083 HR-TB None
ERR3797087 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR387051 HR-TB None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR4769452 HR-TB None
ERR473334 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769450 HR-TB None
ERR4797313 HR-TB None
ERR4769521 HR-TB None
ERR4798431 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799025 Pre-XDR-TB None
ERR4811493 HR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR4810624 HR-TB lineage2.2 None
ERR5908228 Other lineage4.3.3 None
ERR4812155 Sensitive None
ERR6359066 HR-TB lineage4 None
ERR6358837 HR-TB None
ERR6358979 Other None
ERR5917710 Other lineage4.1.2.1 None
ERR6359070 Other lineage4.9 None
ERR6359069 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6866807 HR-TB lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736856 HR-TB lineage4 None
ERR736839 Other None
ERR736831 HR-TB lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR736875 HR-TB lineage4 None
ERR772255 MDR-TB lineage4.3.2 None
ERR7821163 Other lineage2.2.1 None