Rv0565c - p.Ile309Val
Drug resistance types
4 Sensitive
1 RR-TB
9 HR-TB
35 MDR-TB
10 Pre-XDR-TB
5 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage3 | 33 |
| La1.6;La3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage1.1.1.1 | 4 |
| 18 | |
| lineage4.9 | 2 |
| M.canetti;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6797743 | MDR-TB | lineage3 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR4423145 | Pre-XDR-TB | lineage3 | None | SRR29017387 | MDR-TB | lineage3 | None | SRR29017217 | MDR-TB | lineage3 | None | SRR29017159 | MDR-TB | lineage3 | None | SRR29016880 | MDR-TB | lineage3 | None | SRR29017088 | MDR-TB | lineage3 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR13112017 | XDR-TB | lineage3 | None | SRR4423138 | Pre-XDR-TB | lineage3 | None | SRR26399275 | Sensitive | lineage1.1.1.1 | None | SRR29017200 | Pre-XDR-TB | lineage3 | None | SRR29017018 | Pre-XDR-TB | lineage3 | None | ERR4553598 | MDR-TB | None | SRR29016844 | MDR-TB | lineage3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR4553653 | MDR-TB | lineage3 | None | ERR4553565 | MDR-TB | lineage3 | None | ERR4553492 | MDR-TB | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4553869 | MDR-TB | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR29017597 | MDR-TB | lineage3 | None | ERR4553571 | MDR-TB | None | ERR4553417 | MDR-TB | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4553432 | HR-TB | None | ERR4553596 | MDR-TB | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4828260 | Sensitive | lineage1.1.1.1 | vn | SRR29017112 | MDR-TB | lineage3 | None | SRR29017104 | XDR-TB | lineage3 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4553586 | MDR-TB | lineage3 | None | ERR13266986 | Pre-XDR-TB | lineage3 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR29017083 | MDR-TB | lineage3 | None | ERR4553687 | RR-TB | None | ERR4553829 | MDR-TB | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR29017078 | Pre-XDR-TB | lineage3 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR5065655 | Sensitive | lineage1.1.1.1 | vn | ERR4553407 | MDR-TB | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR29017024 | MDR-TB | lineage3 | None | SRR29017560 | XDR-TB | lineage3 | None | SRR29017256 | Pre-XDR-TB | lineage3 | None | SRR29017575 | Pre-XDR-TB | lineage3 | None | SRR29017158 | Pre-XDR-TB | lineage3 | None | ERR4553870 | MDR-TB | lineage2.2.1 | None | SRR29017075 | XDR-TB | lineage3 | None | SRR29017440 | MDR-TB | lineage3 | None | SRR29050795 | Sensitive | lineage1.1.1.1 | None | ERR13112016 | XDR-TB | lineage3 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR29017218 | MDR-TB | lineage3 | None | ERR4553884 | MDR-TB | None | ERR4553502 | MDR-TB | None | SRR29017113 | MDR-TB | lineage3 | None | ERR4553991 | MDR-TB | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4553878 | MDR-TB | None | ERR4553755 | MDR-TB | None | ERR4553840 | MDR-TB | None | ERR4553823 | MDR-TB | None | ERR4553660 | MDR-TB | None | SRR29016811 | MDR-TB | lineage3 | None | SRR29016891 | Pre-XDR-TB | lineage3 | None |
|---|
