Rv0639 - c.150C>T
Drug resistance types
0 Sensitive
0 RR-TB
18 HR-TB
12 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage6.3 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage4.9 | 15 |
| lineage5.2 | 2 |
| La1.7 | 2 |
| lineage4.9;lineage9 | 2 |
| La1.7;lineage4.2 | 1 |
| M.canetti;lineage2.2 | 2 |
| 3 | |
| lineage4.1.2 | 1 |
| La1.7;lineage4.9 | 4 |
| La3;lineage4.9 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.2.BCG | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 61 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR3675222 | Other | La1.7 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046594 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR11252736 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4830353 | HR-TB | La1.7 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR2514692 | Other | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR3273109 | HR-TB | lineage4 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063896 | HR-TB | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None |
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