TB-Profiler
Home
Upload
SRA data
Rv0006
- c.946_948delATCinsGG
Drug resistance types
0 Sensitive
3 RR-TB
17 HR-TB
2 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
19
lineage2.1;lineage4.9
4
4
La1.7;lineage4.9
3
La3;lineage2.1;lineage4.9
3
lineage2.1;lineage4.9;lineage6.3
3
La3;lineage4.9
3
lineage4.1.2.1
2
lineage4
2
La3;lineage2.1;lineage4.9;lineage6.3
2
Showing 1 to 10 of 33 entries
Previous
1
2
3
4
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
70
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR11252612
Other
La3;lineage4.9
None
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR176793
Other
lineage4.1.1.1
None
ERR2027263
Other
lineage4
None
ERR2229542
Other
lineage4.8
None
ERR2513470
Other
lineage4.2.2.2
None
ERR2514692
Other
None
ERR3273109
HR-TB
lineage4
None
Showing 1 to 10 of 70 entries
Previous
1
2
3
4
5
6
7
Next