lineage | Count |
---|---|
lineage4.9 | 10 |
lineage4 | 10 |
39 | |
lineage4.6.2.2 | 2 |
lineage2.2.1 | 2 |
lineage4.7 | 1 |
lineage2.2 | 1 |
La1 | 1 |
lineage1.2.2.2 | 1 |
La1.2 | 1 |
lineage4.8;lineage4.1 | 1 |
La3 | 1 |
lineage1.2.1.2 | 1 |
lineage4.5 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.3 | 1 |
lineage2.1 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 77 |
ID | Drug resistance | Lineage | Country iso2 | SRR6044890 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR8217918 | HR-TB | None | ERR1063857 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063883 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283021 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283024 | Other | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR3797014 | Other | None | ERR3797044 | Other | None | ERR387051 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR3797017 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797086 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR9119669 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR11068282 | Sensitive | lineage4.5 | None | SRR8692822 | Other | lineage4.9 | None | ERR11068607 | Sensitive | lineage4.5 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR8692899 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675501 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675222 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | SRR3675510 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675234 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | SRR5341456 | Other | None | ERR234659 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341313 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | ERR2693231 | Other | None | ERR2693230 | Other | None |
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