EBG00000313339 - n.1962C>T


Drug resistance types
4 Sensitive 0 RR-TB 16 HR-TB 3 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 20 Other
lineage Counts
lineage Count
lineage4.9 19
M.canetti;lineage4.9 1
La1.7;lineage4.9 4
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.8.1 3
lineage2.2.1.2;lineage7 1
La1.7 1
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.2.1 2
lineage4.1.1.3 1
La1.2 1
lineage2.2 1
lineage1.1.1 1
lineage4.3.2.1 1
lineage4.4.2 1
lineage4.9;lineage7 1
lineage4.9;lineage6.1.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 43
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176751 Other lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR11462861 Other La1.8.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3283040 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR3797015 HR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR11466044 Other lineage4.1.1.3 None
ERR6198317 Other La1.2 None
ERR4799513 HR-TB lineage2.2 None
ERR5311094 HR-TB lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR4819314 Other lineage1.1.1 None
SRR6045548 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR736856 Sensitive lineage4.9 None
ERR3797019 Other La1.8.1 None
DRR188519 Other lineage4.4.2 None
SRR14782405 HR-TB lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR5341456 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR7240476 Other La1.8.1 None
SRR3675492 Other La1.7;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR3675389 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR3675509 Other lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None