EBG00000313339 - n.1962C>T
Drug resistance types
2 Sensitive
0 RR-TB
27 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| 22 | |
| La1.8.1 | 2 |
| lineage3 | 1 |
| lineage4.9 | 5 |
| La1.2 | 2 |
| lineage4 | 6 |
| lineage3.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2 | 1 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.4.2 | 1 |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 49 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797046 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR400529 | Other | lineage3 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797518 | MDR-TB | lineage3.1 | in | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR6198317 | Other | La1.2 | None | ERR736856 | HR-TB | lineage4 | None | SRR14782405 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358991 | HR-TB | None | SRR11462861 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3675488 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675222 | Other | None | ERR176751 | HR-TB | None | ERR212034 | HR-TB | None | ERR212121 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR5341456 | Other | None | ERR6359082 | Other | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045399 | Other | None | SRR6046492 | Other | None | SRR6046299 | HR-TB | None | ERR4830517 | MDR-TB | lineage4.4.1.1.1 | za | SRR9971283 | MDR-TB | lineage4.4.1.1.1 | None | DRR188519 | Other | lineage4.4.2 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR4831117 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283040 | HR-TB | None |
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