EBG00000313339 - n.1746T>A
Drug resistance types
20 Sensitive
2 RR-TB
16 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
20 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 29 |
| La1.8.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage2.2.1 | 5 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4 | 1 |
| La3;lineage4.9 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.7;lineage4.9 | 5 |
| 2 | |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage4.1.2.1 | 2 |
| La1.6;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.7 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 69 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675502 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR6044835 | Other | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR13285192 | Sensitive | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4796577 | HR-TB | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR28351488 | MDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR3675222 | Other | La1.7 | None | ERR3797029 | Other | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR6358979 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | DRR188519 | Other | lineage4.4.2 | None | SRR5341453 | Other | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None |
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