Rv1484 - c.753G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
30 Sensitive
0 RR-TB
23 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage4.9 | 7 |
| lineage4.9 | 41 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La2;lineage2.2 | 1 |
| La1.7;lineage4.9 | 6 |
| lineage4.1.2.1 | 5 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1 | 6 |
| La1;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| 7 | |
| lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La1.6;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR9786604 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR1063896 | Sensitive | None | ERR369151 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR6789626 | Other | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9787197 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | None |
|---|
