EBG00000313325 - n.1445delCinsTT
Drug resistance types
5 Sensitive
1 RR-TB
16 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 22 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4 | 2 |
| M.canetti;lineage4.9 | 4 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.4.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| 1 | |
| lineage3.1.2.1;lineage4 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046878 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816656 | Other | lineage4.9 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR11465801 | Other | lineage4.3.4.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR2514692 | Other | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4769450 | Other | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None |
|---|
