lineage | Count |
---|---|
lineage4.9;lineage6.3 | 1 |
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
lineage4.9 | 22 |
La1.7;M.canetti;lineage4.9 | 2 |
lineage4.3.2 | 1 |
lineage1.2.2.1;lineage4.4.1.1 | 2 |
lineage1.1.1 | 1 |
lineage2.2.1;lineage4.1.2.1 | 1 |
M.canetti;lineage4.9 | 4 |
M.canetti;lineage4.9;lineage9 | 1 |
lineage3.1.2.1;lineage4 | 1 |
1 | |
lineage1.1.2 | 1 |
La1.2.BCG | 1 |
lineage4.1.2.1 | 1 |
lineage3.1.2.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.2;lineage4.6.3;lineage4.9 | 1 |
La1.7 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 1 |
lineage2.1;lineage4.3.2;lineage4.9 | 1 |
lineage4.3.4.1 | 1 |
lineage2.1;lineage4.9 | 1 |
La1.7;lineage4.9 | 2 |
lineage4 | 2 |
La1.7;lineage4.2 | 1 |
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1213930 | Other | lineage4.3.2 | pe | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR11488822 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR2514692 | Other | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR11465015 | Sensitive | lineage4.3.4.2.1 | None | ERR4816656 | Other | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR4769452 | Other | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR11465801 | Other | lineage4.3.4.1 | None | SRR3675248 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None |
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