Rv0667 - c.2373C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
22 Sensitive
5 RR-TB
18 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 7 |
| lineage4.9 | 40 |
| lineage2.2.1 | 5 |
| lineage4.3.2.1 | 1 |
| lineage1.1.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.2;lineage4.9 | 3 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.7 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| 1 | |
| lineage4.4.1.1.1 | 1 |
| lineage6 | 1 |
| La3;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 84 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR6045347 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR11662694 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR323037 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR2503461 | HR-TB | lineage1.1.2 | fi | ERR373945 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4816470 | HR-TB | lineage3 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6045371 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR176751 | Other | lineage4.9 | None | ERR4817183 | Sensitive | lineage4.1.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9787336 | RR-TB | lineage6 | None | ERR4769452 | Other | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675270 | Other | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None |
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