lineage | Count |
---|---|
La1.7;lineage4.9 | 8 |
La2;lineage4.9 | 1 |
lineage4.9 | 5 |
La1.7;M.canetti;lineage4.9 | 2 |
lineage4.1.2.1 | 2 |
lineage2.2 | 1 |
La2;lineage2.2 | 1 |
La1.7;lineage4.3.4.1 | 1 |
La1.7 | 1 |
lineage4.3.2.1 | 1 |
lineage3 | 2 |
lineage4.3.4.1 | 2 |
lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 28 |
ID | Drug resistance | Lineage | Country iso2 | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR473332 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | ERR11465801 | Other | lineage4.3.4.1 | None | ERR11465361 | MDR-TB | lineage4.3.4.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR400529 | Other | lineage3 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None |
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