Rv0668 - c.1018_1020delTTGinsCC


Drug resistance types
28 Sensitive 24 RR-TB 61 HR-TB 56 MDR-TB 11 Pre-XDR-TB 1 XDR-TB 70 Other
lineage Counts
lineage Count
lineage4.9 61
lineage4.9;lineage9 2
lineage2.1;lineage4.9 5
lineage4 4
lineage2.2.1;lineage2.2.2 3
lineage2.2.1 23
lineage4.6.2.2 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.2.1 9
lineage2.2.2 10
M.canetti;lineage2.1;lineage4.9 14
M.canetti;lineage2.1;lineage6.3 2
La3;lineage4.9 5
lineage4.6.1.1 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.1.3 1
lineage4.4.1.2 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage2;lineage4.9 2
lineage4.9;lineage7 3
lineage2;lineage4 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 3
lineage1.1 1
M.canetti;lineage2.1;lineage3 1
lineage2.2 4
lineage2.2.2;lineage4 4
5
La1.7;lineage4.9 2
lineage4.4.1.1.1 2
lineage6.3.1 1
M.canetti;lineage2.1;lineage4 1
La3;lineage2.1;lineage4.9 2
lineage2.2.1;lineage4 3
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
lineage3 4
lineage4.8 3
lineage4.1.1.1 2
lineage2.2;lineage4 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage3 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.2.1.1 2
lineage3.1.2.1;lineage4.9 1
lineage4.3.3 1
lineage4.9;lineage6.3 1
La1.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 1
lineage2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage3.1 1
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1;lineage4.8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
La1.2;La1.8.1 1
lineage2 1
lineage3.1.2.2 1
lineage4.3.2.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.3.4.1 1
lineage6.1.3 1
lineage2.2.1.1;lineage4 1
lineage2.2.1;lineage4.9 1
lineage1.1.1;lineage4 1
lineage4.5 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage4.3.4 1
lineage4.3.4.2.1 1
La1.8.1 1
La3;lineage1.1.2 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 251
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR15014655 Other M.canetti;lineage1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SAMN02360574 HR-TB lineage2.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR1013608 Sensitive lineage2.2.2 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR1165699 Other lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3797062 RR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR3797047 MDR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1048853 HR-TB lineage2;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1180399 Sensitive lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR4769452 Other lineage4.9 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR6359082 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
ERR4817069 RR-TB None
SRR25827682 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
SRR1013634 MDR-TB lineage2.2.2 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR9787139 Other lineage6.3.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR1180375 Sensitive lineage4.9 None
SRR1013577 HR-TB lineage2.2.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR6046839 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR18003019 Other lineage2.2.1 None
SRR5535933 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4821053 RR-TB lineage3 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1048994 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SRR1048982 HR-TB lineage2.2.1.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR4818583 Other lineage4.3.3 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
ERR2229143 RR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1048975 HR-TB lineage2.2.1 None
ERR4816478 HR-TB lineage4 None
ERR978766 RR-TB lineage4.8 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
SRR3675275 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1180345 Other lineage4.9 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1049040 HR-TB lineage2 None
ERR4816470 HR-TB lineage3 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR1048998 HR-TB lineage2.2.1 None
ERR4820854 Other lineage4.1.2.1 None
SRR1013584 HR-TB lineage2.2.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
SRR6046376 Other lineage3 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR1183054 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1013610 Sensitive lineage4 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR14782405 HR-TB lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR21677886 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6044835 Other lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR21732954 Sensitive lineage4.9 None
ERR502470 RR-TB lineage4.9 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
ERR7821163 Other lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4818110 Sensitive lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR1049023 HR-TB lineage4.9 None
SRR1048966 MDR-TB lineage2.2.1 None
SAMN02360579 HR-TB lineage2.2.1.1 None
ERR987722 MDR-TB None
ERR212001 HR-TB None
ERR752229 Other lineage4.5 None
SRR1180406 Sensitive lineage4.9 None
SRR1013602 HR-TB lineage2.2.1 None
SRR1181403 Other lineage4.9 None
SRR1013589 HR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR736817 HR-TB lineage4.3.4 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1180440 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3797067 Other La1.8.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1013612 Sensitive lineage4.5 None
SRR26399973 Other La3;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR3797048 Other La3;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR20969731 Other lineage2.2.1 None