Rv0668 - c.1018_1020delTTGinsCC


Drug resistance types
58 Sensitive 55 RR-TB 137 HR-TB 137 MDR-TB 22 Pre-XDR-TB 3 XDR-TB 176 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 26
lineage2.2.1 53
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.3.3 2
lineage2.2.2 22
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
lineage4.9;lineage6.3 5
lineage4.9 133
lineage2.2.1;lineage4 5
lineage4.1.1.1 4
lineage2.2.2;lineage4.9 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
lineage4.1;lineage4.8 2
lineage4.9;lineage7 5
lineage3 14
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2;lineage4.9 3
La1.7.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La2;lineage4.9 1
La1.7 2
lineage4.6.1.1 2
lineage4.1.2.1 19
lineage4 8
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.1.3 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 16
La3;lineage2 1
lineage2.1 3
M.canetti;lineage2.1 1
lineage2.2.1;lineage2.2.2 4
lineage4.4.1.2 2
lineage2.1;lineage4.9;lineage6.3 10
lineage2;lineage4 1
lineage2.2.1;lineage4.9 2
La3;lineage4.9 10
lineage2.2.2;lineage4 5
La1.7.1 1
La1.7;M.canetti;lineage4.9 4
M.canetti;lineage2.2 3
lineage4.3.4.2.1 3
lineage4.5 4
M.canetti;lineage2.1;lineage3 1
lineage4.7 1
lineage2.2 5
20
La3;lineage2.1;lineage6.3 1
lineage1.1.2;lineage4 1
La1.2.BCG 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1 2
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La1.8.1 3
lineage3.1.2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage3.1.1 2
lineage4.6.2.2 3
La1.7;lineage4.9 5
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage4.8 9
lineage4.4.1.1.1 2
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.2;lineage4 3
La3;M.canetti;lineage2.1;lineage4.9 12
lineage2.1;lineage4.3.2 1
lineage4.1.2 1
lineage6.1.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3 1
La3;lineage2.2.1 1
lineage2.2.1.1;lineage4 1
lineage4.6.3;lineage4.9;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La3;M.canetti;lineage4.9 2
La1;lineage4.9 1
M.canetti;lineage4.9 5
lineage2.1;lineage6.3 2
lineage2.1;lineage4.9;lineage7 1
La3;lineage4.8 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
La1.7.X-unk4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage4.3.2.1 1
lineage5.2 2
lineage4.3.2;lineage4.9 1
La2;lineage4.9;lineage9 1
La1.3 1
M.canetti;lineage2.1;lineage6.3 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage1.1.1 1
lineage4.3.1;lineage4.9;lineage6 1
La1.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.3.4.1 1
lineage1.2.2.2 1
La3;lineage2.1;lineage4.9 2
lineage4.9;lineage9 3
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage1.1.1;lineage4 1
La3;M.canetti;lineage3.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage4 1
lineage4.4.2 1
M.canetti;lineage4.9;lineage9 1
lineage2.2.1.1 2
lineage4.6.3;lineage4.9 2
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.2.2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.2;lineage4.9 1
lineage2 1
M.canetti;lineage4.3.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage2.2.1;lineage3 1
lineage4.2.2.1 1
lineage4.9;lineage6.1.3 1
La1.2;La1.8.1 1
lineage1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage3.1.2.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage1 1
spoligotype Counts
spoligotype Count
None 588
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1048998 HR-TB lineage2.2.1 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4818583 Other lineage4.3.3 None
SRR1013584 HR-TB lineage2.2.2 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR1013617 Sensitive lineage2.2.1;lineage4 None
ERR1063862 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR5709967 MDR-TB lineage2.2.1 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
SAMN02360580 HR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR3675221 Other lineage4.9 None
SRR6046376 Other lineage3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
ERR1063858 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 MDR-TB La2;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4830353 HR-TB La1.7 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1013610 Sensitive lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3797047 MDR-TB lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1048997 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR1180399 Sensitive lineage4.9 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR3675222 Other La1.7 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
ERR4769452 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR3468607 RR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1048969 HR-TB lineage2.2.1;lineage2.2.2 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR212125 HR-TB lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR7821163 Other lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR3675243 MDR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
ERR6359082 Other lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1175506 Sensitive lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SAMN02360585 HR-TB lineage4.5 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR11662690 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
SRR5341456 Other lineage4.9 None
SRR1049023 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR108125 RR-TB lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1047996 MDR-TB lineage2.2.2 None
ERR9786671 Other None
ERR4817069 RR-TB None
ERR9117709 Other None
ERR234659 HR-TB None
SRR25827682 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
SRR1013607 HR-TB lineage2.2.2 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
SRR3675441 RR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800341 HR-TB lineage3 None
ERR4810624 MDR-TB lineage2.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675507 RR-TB lineage4.9 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR3797067 Other La1.8.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1180420 Sensitive lineage4.9 None
SRR1013613 Sensitive lineage2.2.1 None
SRR6046839 Other lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR6045217 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1196474 Other lineage3.1.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2446566 Other lineage4.9 None
SRR1013608 Sensitive lineage2.2.2 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR1183054 Sensitive lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1048975 HR-TB lineage2.2.1 None
ERR4596910 Sensitive lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675541 Sensitive lineage4.9 None
SRR9971112 HR-TB lineage2.2.1 None
SRR1181289 RR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6044875 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR3797062 RR-TB lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR6044815 RR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6044876 Sensitive lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR473332 Other lineage4.9 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1048992 HR-TB lineage2.2;lineage4 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1048853 HR-TB lineage2;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
ERR11081258 Other lineage4.8 None
ERR4818347 Other lineage4.1.2 None
ERR9787153 Other lineage6.1.3 None
SRR1196546 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502470 RR-TB lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR9971122 MDR-TB lineage4.8 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR6045191 Sensitive lineage4.9 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
ERR9787165 Other lineage6.1.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR1144744 HR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR1013618 RR-TB lineage2.2.1;lineage4 None
SRR1013597 Sensitive lineage2.2.2;lineage4 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736856 HR-TB lineage4.9 None
SRR1048966 MDR-TB lineage2.2.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR9786604 Other None
ERR4815604 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR752229 Other lineage4.5 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR1013589 HR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4821172 RR-TB lineage4.9 None
SRR1013634 MDR-TB lineage2.2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR4817893 Other La3;lineage4.8 None
SRR1013604 HR-TB lineage2.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR1165506 Other lineage4.1.2.1 None
SRR1180345 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1048980 HR-TB lineage3 None
SRR16156697 RR-TB lineage2.2.1 None
SRR3675270 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1013598 Sensitive lineage2.2.2;lineage4 None
SRR18003019 Other lineage2.2.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4821053 RR-TB lineage3 None
SRR20969708 HR-TB lineage2.2 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1048868 Pre-XDR-TB lineage2.2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR4799513 HR-TB lineage2.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR176779 HR-TB lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1180319 Sensitive lineage4.9 None
ERR4769436 Other La1.3 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
SAMN02360577 HR-TB lineage3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR3283042 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR14066533 RR-TB lineage1.1.1 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4769418 Other La1.2 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR1180444 Sensitive lineage4.9 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR9786694 Other lineage4.1.2.1 None
ERR11466499 Other lineage4.3.4.1 None
SRR3675457 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1180391 Sensitive lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
SRR21732954 Sensitive lineage4.9 None
SRR1048981 HR-TB lineage3 None
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR4819241 Other lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283006 RR-TB lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR1180410 Sensitive lineage4.9 None
SRR1013553 MDR-TB lineage2.2.2 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR4811493 HR-TB lineage4.9 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR3283028 Other La3;lineage4 None
DRR188519 Other lineage4.4.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR6045053 Other lineage4 None
SRR7496509 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9786843 Other None
SRR1640750 RR-TB None
SRR7535086 Other None
ERR987722 MDR-TB None
ERR4407463 HR-TB None
SRR1180406 Sensitive lineage4.9 None
SRR1013602 HR-TB lineage2.2.1 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4808964 RR-TB lineage2.2.1 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675275 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
SAMN02360583 HR-TB lineage2.2.2 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR9787139 Other lineage6.3.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR6785413 Other lineage2.2.1 None
SRR6046046 Other lineage4.9 None
SRR1048965 HR-TB lineage2.2.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR6046878 Other lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
SRR1013596 Sensitive lineage3 None
SRR1013612 Sensitive lineage4.5 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4815556 RR-TB lineage3 None
SRR1181402 Sensitive lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR1144809 HR-TB lineage2.2.1 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675487 MDR-TB M.canetti;lineage4.9 None
SRR3675214 Other lineage4.9 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
ERR3283044 Other lineage4 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1048985 HR-TB lineage2.2.1 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SAMN02360586 HR-TB lineage2.2.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1013633 MDR-TB lineage2.2.2 None
SRR6046593 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1180312 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1049040 HR-TB lineage2 None
ERR4816470 HR-TB lineage3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797063 Other La3;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR7496471 Sensitive lineage4 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SAMEA3501073 RR-TB lineage4.8 None
SRR1048994 HR-TB lineage4.9 None
SRR1047993 HR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR2513259 Other lineage3 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
ERR4816151 Other lineage4.8 None
ERR387051 RR-TB lineage4.9 None
SRR1013614 Sensitive lineage2.2.1 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR1791696 RR-TB La1.8.1 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR1175487 Sensitive lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1013609 Sensitive lineage4 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1048987 HR-TB lineage2.2.1 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1181351 Sensitive lineage4.9 None
SRR16149126 MDR-TB lineage4.2.2.1 None
SRR6045347 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR7240033 Other La1.2;La1.8.1 None
SRR1048885 HR-TB lineage2.2;lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR9029360 MDR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR1048982 HR-TB lineage2.2.1.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR5162090 RR-TB lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675482 RR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3283031 Other La3;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1180226 HR-TB lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR1049004 HR-TB lineage2.2.2 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
SRR1048996 Sensitive lineage4.5 None
ERR6358755 Other lineage4.6.1.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1013603 HR-TB lineage2.2.1 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR15315797 RR-TB lineage2.2.1 None
SRR26159043 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3283032 Other lineage4.9 None
SRR1048993 HR-TB lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR3675248 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None