Rv0006 - c.789C>A


Drug resistance types
4 Sensitive 1 RR-TB 57 HR-TB 9 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 57 Other
lineage Counts
lineage Count
79
lineage2.2.1 7
lineage2.2 2
lineage4.1.1.3 1
La2 1
lineage4.1.2.1 2
lineage4.7 1
lineage4.9 8
lineage4 5
lineage2 3
lineage3 2
lineage4.6.1.1 1
lineage4.1.2.1.1 1
La3 1
lineage4.3.3 2
lineage3.1 2
lineage4.5 1
lineage4.9;La3 1
La1.2 1
lineage6.3;lineage2.2.1 1
lineage4.3.4.2.1 1
lineage4.1.1 1
lineage4.3.4 1
lineage4.3 1
lineage4.8 1
lineage4;lineage1.1.2 1
lineage4.8;La3 1
lineage4.1;lineage1 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 131
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4830353 Other None
SRR6458421 MDR-TB lineage2.2.1 None
SRR6046460 HR-TB None
SRR6046540 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
ERR4831546 HR-TB lineage2.2 None
ERR495095 Sensitive lineage4.1.1.3 None
SRR7496509 Other None
SRR6785267 Other lineage2.2.1 None
SRR6789626 Other None
ERR502524 HR-TB La2 None
SRR7131023 Other lineage4.1.2.1 None
SRR7496523 Other lineage4.7 None
ERR1034652 Other None
SRR7535086 Other None
ERR323043 HR-TB None
SRR7585435 Other lineage4.9 None
SRR1167384 Other lineage4 None
ERR1035157 Other lineage4.9 None
ERR5336148 Other None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR736874 HR-TB None
ERR9786671 Other None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3797069 Other None
ERR4407463 HR-TB None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR9117709 HR-TB None
SRR1169249 Other La3 None
SRR1169194 Other None
SRR1169306 Other None
SRR1172234 Other None
SRR1172817 HR-TB None
SRR1172728 MDR-TB None
SRR1172951 Other None
SRR1172857 MDR-TB None
SRR1173400 Other None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173633 HR-TB lineage4.9 None
SRR1173484 Other lineage4 None
SRR1184294 HR-TB None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1173629 Other None
SRR1184372 MDR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1196677 HR-TB lineage2 None
SRR1184380 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1196494 MDR-TB None
SRR1196546 HR-TB None
SRR12142341 HR-TB None
SRR1196768 MDR-TB None
SRR12416824 HR-TB None
SRR19304036 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR15368973 Other None
SRR19303884 HR-TB None
SRR26399973 Other lineage4.9;La3 None
SRR20969677 HR-TB lineage2 None
ERR4815604 HR-TB None
SRR23961549 Other La1.2 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR161034 Other lineage4.3.4.2.1 None
ERR176793 Other lineage4.1.1 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675488 HR-TB None
SRR3675465 HR-TB None
ERR212001 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
SRR3675501 HR-TB None
SRR3675236 HR-TB None
ERR176568 Other lineage4.3 None
ERR2229542 Other lineage4.8 None
ERR2027263 Other lineage4 None
ERR181744 HR-TB None
SRR3675221 HR-TB None
SRR3675222 Other None
ERR176643 HR-TB None
SRR3675311 Other None
ERR176751 HR-TB None
ERR4816999 Other None
ERR4817037 Other lineage4.9 None
ERR212033 HR-TB None
SRR3675572 Other None
ERR4817060 RR-TB None
SRR3675574 HR-TB None
ERR212123 Other None
SRR3742665 HR-TB None
ERR4817692 HR-TB lineage4;lineage1.1.2 None
ERR4816585 Other lineage2.2 None
ERR4817893 Other lineage4.8;La3 None
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR4818110 Sensitive lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR4818021 Other La1.8.1 None
ERR4819051 Other lineage4 None
ERR234659 HR-TB None
ERR4818615 Other None
ERR4818394 Other lineage4.9 None
SRR5007188 Other lineage4 None
ERR4819781 Other lineage2.2.1 None
ERR2514692 Other None
ERR4820854 Other lineage4.1.2.1 None
SRR5341302 HR-TB None
SRR5341333 HR-TB None
ERR4821053 Other lineage3 None
SRR6045327 HR-TB None
SRR6045503 HR-TB None
SRR6045526 HR-TB None
SRR6044790 HR-TB None
SRR6046066 HR-TB None
SRR6046225 HR-TB None
SRR6046362 HR-TB None
SRR6046305 Other lineage4.9 None