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SRA data
Rv3596c
- c.1695G>C
Drug resistance types
2 Sensitive
1 RR-TB
5 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
5
La1.7;lineage4.9
5
lineage2.2.1
3
La1.7;M.canetti;lineage4.9
2
lineage3
2
lineage4.3.2.1
2
lineage2.2.2
1
lineage4.3.3
1
lineage4.1.1.3
1
lineage4.3.4.2.1
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
24
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR4769433
RR-TB
lineage4.9
None
ERR4816322
Other
lineage4.9
None
ERR4816852
Other
lineage4.9
None
ERR4830353
Other
La1.7
None
ERR9786076
Sensitive
lineage3
None
ERR990545
Other
lineage3
None
SRR1238558
Other
lineage4.9
None
SRR12708370
Pre-XDR-TB
lineage2.2.2
None
SRR12708392
Other
lineage2.2.1
None
SRR12708396
MDR-TB
lineage4.3.2.1
None
Showing 1 to 10 of 24 entries
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