lineage | Count |
---|---|
31 | |
lineage4.1 | 1 |
lineage4 | 42 |
lineage4.2.1 | 1 |
lineage4.9 | 7 |
lineage4.2.1.1 | 1 |
lineage4.1.2.1;lineage2.2.1 | 1 |
lineage3 | 1 |
lineage4.6.2.2 | 2 |
lineage4.3.4 | 1 |
lineage1.1.2 | 1 |
lineage1.1.3.2 | 1 |
lineage4.3.2.1 | 1 |
lineage6.1.3 | 1 |
lineage1.1.1 | 1 |
La1.8.1 | 1 |
La1.7.1 | 1 |
spoligotype | Count |
---|---|
None | 95 |
ID | Drug resistance | Lineage | Country iso2 | ERR176778 | HR-TB | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR158583 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675502 | Other | None | SRR3675222 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675550 | Other | None | SRR5341418 | Other | None | ERR1035162 | Other | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045519 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045332 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6046397 | Other | None | SRR6511621 | HR-TB | None | ERR4830353 | Other | None | SRR6046824 | HR-TB | None | ERR1063859 | HR-TB | None | ERR502943 | HR-TB | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR1063862 | HR-TB | None | ERR502889 | Other | None | ERR323045 | HR-TB | None | ERR067681 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283021 | HR-TB | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363447 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR400529 | Other | lineage3 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4797474 | Other | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None |
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