lineage | Count |
---|---|
lineage4.4.1.1.1 | 2 |
lineage4.9 | 38 |
La1.8.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 2 |
lineage2 | 1 |
La1.7.1 | 1 |
lineage3.1.3 | 1 |
lineage4 | 20 |
15 | |
lineage4.3.4.2.1 | 4 |
lineage3 | 4 |
lineage4;lineage2 | 1 |
lineage4.8 | 1 |
lineage1.1.1 | 1 |
lineage4.3.4.1 | 4 |
lineage4.5 | 1 |
lineage4.1.2.1 | 2 |
lineage4.4.1.2 | 1 |
lineage4.9.1 | 1 |
lineage4.7 | 1 |
lineage2.2.1 | 2 |
lineage4;lineage3.1 | 1 |
La1.3 | 2 |
lineage4.3.4 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 110 |
ID | Drug resistance | Lineage | Country iso2 | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | ERR4815471 | Other | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR181824 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR176651 | HR-TB | None | SRR3675510 | Other | None | ERR181887 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR212138 | HR-TB | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819933 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | ERR067712 | HR-TB | lineage4 | None | SRR7496471 | Sensitive | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR736848 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR736856 | HR-TB | lineage4 | None |
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